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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1998 1
1999 1
2000 4
2001 3
2002 2
2003 5
2004 4
2005 2
2006 3
2007 5
2008 2
2009 3
2010 6
2011 6
2012 4
2013 4
2014 4
2015 2
2016 3
2017 1
2018 5
2019 3
2020 7
2021 10
2022 7
2023 3
2024 1

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100 results

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Page 1
A High-Resolution View of Adaptive Event Dynamics in a Plasmid.
Mei H, Arbeithuber B, Cremona MA, DeGiorgio M, Nekrutenko A. Mei H, et al. Among authors: nekrutenko a. Genome Biol Evol. 2019 Oct 1;11(10):3022-3034. doi: 10.1093/gbe/evz197. Genome Biol Evol. 2019. PMID: 31539047 Free PMC article.
Comparative genomics.
Miller W, Makova KD, Nekrutenko A, Hardison RC. Miller W, et al. Among authors: nekrutenko a. Annu Rev Genomics Hum Genet. 2004;5:15-56. doi: 10.1146/annurev.genom.5.061903.180057. Annu Rev Genomics Hum Genet. 2004. PMID: 15485342 Review.
HyPhy 2.5-A Customizable Platform for Evolutionary Hypothesis Testing Using Phylogenies.
Kosakovsky Pond SL, Poon AFY, Velazquez R, Weaver S, Hepler NL, Murrell B, Shank SD, Magalis BR, Bouvier D, Nekrutenko A, Wisotsky S, Spielman SJ, Frost SDW, Muse SV. Kosakovsky Pond SL, et al. Among authors: nekrutenko a. Mol Biol Evol. 2020 Jan 1;37(1):295-299. doi: 10.1093/molbev/msz197. Mol Biol Evol. 2020. PMID: 31504749 Free PMC article.
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework.
Tekman M, Batut B, Ostrovsky A, Antoniewski C, Clements D, Ramirez F, Etherington GJ, Hotz HR, Scholtalbers J, Manning JR, Bellenger L, Doyle MA, Heydarian M, Huang N, Soranzo N, Moreno P, Mautner S, Papatheodorou I, Nekrutenko A, Taylor J, Blankenberg D, Backofen R, Grüning B. Tekman M, et al. Among authors: nekrutenko a. Gigascience. 2020 Oct 20;9(10):giaa102. doi: 10.1093/gigascience/giaa102. Gigascience. 2020. PMID: 33079170 Free PMC article.
Galaxy: a web-based genome analysis tool for experimentalists.
Blankenberg D, Von Kuster G, Coraor N, Ananda G, Lazarus R, Mangan M, Nekrutenko A, Taylor J. Blankenberg D, et al. Among authors: nekrutenko a. Curr Protoc Mol Biol. 2010 Jan;Chapter 19:Unit 19.10.1-21. doi: 10.1002/0471142727.mb1910s89. Curr Protoc Mol Biol. 2010. PMID: 20069535 Free PMC article.
Community-Driven Data Analysis Training for Biology.
Batut B, Hiltemann S, Bagnacani A, Baker D, Bhardwaj V, Blank C, Bretaudeau A, Brillet-Guéguen L, Čech M, Chilton J, Clements D, Doppelt-Azeroual O, Erxleben A, Freeberg MA, Gladman S, Hoogstrate Y, Hotz HR, Houwaart T, Jagtap P, Larivière D, Le Corguillé G, Manke T, Mareuil F, Ramírez F, Ryan D, Sigloch FC, Soranzo N, Wolff J, Videm P, Wolfien M, Wubuli A, Yusuf D; Galaxy Training Network; Taylor J, Backofen R, Nekrutenko A, Grüning B. Batut B, et al. Among authors: nekrutenko a. Cell Syst. 2018 Jun 27;6(6):752-758.e1. doi: 10.1016/j.cels.2018.05.012. Cell Syst. 2018. PMID: 29953864 Free PMC article.
In memory of James Taylor: the birth of Galaxy.
Nekrutenko A, Schatz MC. Nekrutenko A, et al. Genome Biol. 2020 Apr 30;21(1):105. doi: 10.1186/s13059-020-02016-0. Genome Biol. 2020. PMID: 32354350 Free PMC article. No abstract available.
Sequencing error profiles of Illumina sequencing instruments.
Stoler N, Nekrutenko A. Stoler N, et al. Among authors: nekrutenko a. NAR Genom Bioinform. 2021 Mar 27;3(1):lqab019. doi: 10.1093/nargab/lqab019. eCollection 2021 Mar. NAR Genom Bioinform. 2021. PMID: 33817639 Free PMC article.
100 results