Nair A - Search Results

1

Distinct epigenetic landscapes underlie the pathobiology of pancreatic cancer subtypes.

Lomberk G, Blum Y, Nicolle R, Nair A, Gaonkar KS, Marisa L, Mathison A, Sun Z, Yan H, Elarouci N, Armenoult L, Ayadi M, Ordog T, Lee JH, Oliver G, Klee E, Moutardier V, Gayet O, Bian B, Duconseil P, Gilabert M, Bigonnet M, Garcia S, Turrini O, Delpero JR, Giovannini M, Grandval P, Gasmi M, Secq V, De Reyniès A, Dusetti N, Iovanna J, Urrutia R. Lomberk G, et al. Among authors: nair a. Nat Commun. 2018 May 17;9(1):1978. doi: 10.1038/s41467-018-04383-6. Nat Commun. 2018. PMID: 29773832 Free PMC article.

2

TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data.

Asmann YW, Middha S, Hossain A, Baheti S, Li Y, Chai HS, Sun Z, Duffy PH, Hadad AA, Nair A, Liu X, Zhang Y, Klee EW, Kalari KR, Kocher JP. Asmann YW, et al. Among authors: nair a. Bioinformatics. 2012 Jan 15;28(2):277-8. doi: 10.1093/bioinformatics/btr612. Epub 2011 Nov 15. Bioinformatics. 2012. PMID: 22088845 Free PMC article.

3

Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol.

Sun Z, Asmann YW, Nair A, Zhang Y, Wang L, Kalari KR, Bhagwate AV, Baker TR, Carr JM, Kocher JP, Perez EA, Thompson EA. Sun Z, et al. Among authors: nair a. PLoS One. 2013 Aug 19;8(8):e71745. doi: 10.1371/journal.pone.0071745. eCollection 2013. PLoS One. 2013. PMID: 23977132 Free PMC article.

4

RNA sequencing shows transcriptomic changes in rectosigmoid mucosa in patients with irritable bowel syndrome-diarrhea: a pilot case-control study.

Camilleri M, Carlson P, Acosta A, Busciglio I, Nair AA, Gibbons SJ, Farrugia G, Klee EW. Camilleri M, et al. Among authors: nair aa. Am J Physiol Gastrointest Liver Physiol. 2014 Jun 15;306(12):G1089-98. doi: 10.1152/ajpgi.00068.2014. Epub 2014 Apr 24. Am J Physiol Gastrointest Liver Physiol. 2014. PMID: 24763552 Free PMC article.

5

Identification of candidate genes for prostate cancer-risk SNPs utilizing a normal prostate tissue eQTL data set.

Thibodeau SN, French AJ, McDonnell SK, Cheville J, Middha S, Tillmans L, Riska S, Baheti S, Larson MC, Fogarty Z, Zhang Y, Larson N, Nair A, O'Brien D, Wang L, Schaid DJ. Thibodeau SN, et al. Among authors: nair a. Nat Commun. 2015 Nov 27;6:8653. doi: 10.1038/ncomms9653. Nat Commun. 2015. PMID: 26611117 Free PMC article.

6

Retinoblastoma Binding Protein 4 Modulates Temozolomide Sensitivity in Glioblastoma by Regulating DNA Repair Proteins.

Kitange GJ, Mladek AC, Schroeder MA, Pokorny JC, Carlson BL, Zhang Y, Nair AA, Lee JH, Yan H, Decker PA, Zhang Z, Sarkaria JN. Kitange GJ, et al. Among authors: nair aa. Cell Rep. 2016 Mar 22;14(11):2587-98. doi: 10.1016/j.celrep.2016.02.045. Epub 2016 Mar 10. Cell Rep. 2016. PMID: 26972001 Free PMC article.

7

The Role of the Histone Methyltransferase Enhancer of Zeste Homolog 2 (EZH2) in the Pathobiological Mechanisms Underlying Inflammatory Bowel Disease (IBD).

Sarmento OF, Svingen PA, Xiong Y, Sun Z, Bamidele AO, Mathison AJ, Smyrk TC, Nair AA, Gonzalez MM, Sagstetter MR, Baheti S, McGovern DP, Friton JJ, Papadakis KA, Gautam G, Xavier RJ, Urrutia RA, Faubion WA. Sarmento OF, et al. Among authors: nair aa. J Biol Chem. 2017 Jan 13;292(2):706-722. doi: 10.1074/jbc.M116.749663. Epub 2016 Dec 1. J Biol Chem. 2017. PMID: 27909059 Free PMC article.

8

Combined AURKA and H3K9 Methyltransferase Targeting Inhibits Cell Growth By Inducing Mitotic Catastrophe.

Mathison A, Salmonson A, Missfeldt M, Bintz J, Williams M, Kossak S, Nair A, de Assuncao TM, Christensen T, Buttar N, Iovanna J, Huebert R, Lomberk G. Mathison A, et al. Among authors: nair a. Mol Cancer Res. 2017 Aug;15(8):984-997. doi: 10.1158/1541-7786.MCR-17-0063. Epub 2017 Apr 25. Mol Cancer Res. 2017. PMID: 28442587 Free PMC article.

9

UClncR: Ultrafast and comprehensive long non-coding RNA detection from RNA-seq.

Sun Z, Nair A, Chen X, Prodduturi N, Wang J, Kocher JP. Sun Z, et al. Among authors: nair a. Sci Rep. 2017 Oct 27;7(1):14196. doi: 10.1038/s41598-017-14595-3. Sci Rep. 2017. PMID: 29079769 Free PMC article.

10

Comprehensive Profiling of lincRNAs in Lung Adenocarcinoma of Never Smokers Reveals Their Roles in Cancer Development and Prognosis.

Li Y, Wang Z, Nair A, Song W, Yang P, Zhang X, Sun Z. Li Y, et al. Among authors: nair a. Genes (Basel). 2017 Nov 13;8(11):321. doi: 10.3390/genes8110321. Genes (Basel). 2017. PMID: 29137177 Free PMC article.

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