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Disentangling the genetic basis of rhizosphere microbiome assembly in tomato.
Oyserman BO, Flores SS, Griffioen T, Pan X, van der Wijk E, Pronk L, Lokhorst W, Nurfikari A, Paulson JN, Movassagh M, Stopnisek N, Kupczok A, Cordovez V, Carrión VJ, Ligterink W, Snoek BL, Medema MH, Raaijmakers JM. Oyserman BO, et al. Among authors: movassagh m. Nat Commun. 2022 Jun 16;13(1):3228. doi: 10.1038/s41467-022-30849-9. Nat Commun. 2022. PMID: 35710629 Free PMC article.
Vaginal microbiome topic modeling of laboring Ugandan women with and without fever.
Movassagh M, Bebell LM, Burgoine K, Hehnly C, Zhang L, Moran K, Sheldon K, Sinnar SA, Mbabazi-Kabachelor E, Kumbakumba E, Bazira J, Ochora M, Mulondo R, Nsubuga BK, Weeks AD, Gladstone M, Olupot-Olupot P, Ngonzi J, Roberts DJ, Meier FA, Irizarry RA, Broach JR, Schiff SJ, Paulson JN. Movassagh M, et al. NPJ Biofilms Microbiomes. 2021 Sep 10;7(1):75. doi: 10.1038/s41522-021-00244-1. NPJ Biofilms Microbiomes. 2021. PMID: 34508087 Free PMC article.
Immune activation during Paenibacillus brain infection in African infants with frequent cytomegalovirus co-infection.
Isaacs AM, Morton SU, Movassagh M, Zhang Q, Hehnly C, Zhang L, Morales DM, Sinnar SA, Ericson JE, Mbabazi-Kabachelor E, Ssenyonga P, Onen J, Mulondo R, Hornig M, Warf BC, Broach JR, Townsend RR, Limbrick DD Jr, Paulson JN, Schiff SJ. Isaacs AM, et al. Among authors: movassagh m. iScience. 2021 Mar 23;24(4):102351. doi: 10.1016/j.isci.2021.102351. eCollection 2021 Apr 23. iScience. 2021. PMID: 33912816 Free PMC article.
Systematic pan-cancer analysis of somatic allele frequency.
Spurr L, Li M, Alomran N, Zhang Q, Restrepo P, Movassagh M, Trenkov C, Tunnessen N, Apanasovich T, Crandall KA, Edwards N, Horvath A. Spurr L, et al. Among authors: movassagh m. Sci Rep. 2018 May 16;8(1):7735. doi: 10.1038/s41598-018-25462-0. Sci Rep. 2018. PMID: 29769535 Free PMC article.
Overexpressed somatic alleles are enriched in functional elements in Breast Cancer.
Restrepo P, Movassagh M, Alomran N, Miller C, Li M, Trenkov C, Manchev Y, Bahl S, Warnken S, Spurr L, Apanasovich T, Crandall K, Edwards N, Horvath A. Restrepo P, et al. Among authors: movassagh m. Sci Rep. 2017 Aug 15;7(1):8287. doi: 10.1038/s41598-017-08416-w. Sci Rep. 2017. PMID: 28811643 Free PMC article.
SNPlice: variants that modulate Intron retention from RNA-sequencing data.
Mudvari P, Movassagh M, Kowsari K, Seyfi A, Kokkinaki M, Edwards NJ, Golestaneh N, Horvath A. Mudvari P, et al. Among authors: movassagh m. Bioinformatics. 2015 Apr 15;31(8):1191-8. doi: 10.1093/bioinformatics/btu804. Epub 2014 Dec 6. Bioinformatics. 2015. PMID: 25481010 Free PMC article.
43 results