Motta S - Search Results

1

Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form.

Soshilov AA, Motta S, Bonati L, Denison MS. Soshilov AA, et al. Among authors: motta s. Int J Mol Sci. 2020 Apr 2;21(7):2474. doi: 10.3390/ijms21072474. Int J Mol Sci. 2020. PMID: 32252465 Free PMC article.

2

Design of gliadin peptide analogues with low affinity for the celiac disease associated HLA-DQ2 protein.

Fraccalvieri D, Motta S, Galliani G, Cavaletti L, Bonati L. Fraccalvieri D, et al. Among authors: motta s. Mol Biosyst. 2014 Aug;10(8):2064-73. doi: 10.1039/c4mb00085d. Mol Biosyst. 2014. PMID: 24841193

3

Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms.

Bonati L, Corrada D, Tagliabue SG, Motta S. Bonati L, et al. Among authors: motta s. Curr Opin Toxicol. 2017 Feb;2:42-49. doi: 10.1016/j.cotox.2017.01.011. Epub 2017 Feb 1. Curr Opin Toxicol. 2017. PMID: 28497129 Free PMC article.

4

Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches.

Motta S, Bonati L. Motta S, et al. J Chem Inf Model. 2017 Jul 24;57(7):1563-1578. doi: 10.1021/acs.jcim.7b00125. Epub 2017 Jun 30. J Chem Inf Model. 2017. PMID: 28616990

5

Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics.

Motta S, Minici C, Corrada D, Bonati L, Pandini A. Motta S, et al. PLoS Comput Biol. 2018 Feb 28;14(2):e1006021. doi: 10.1371/journal.pcbi.1006021. eCollection 2018 Feb. PLoS Comput Biol. 2018. PMID: 29489822 Free PMC article.

6

Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods.

Motta S, Callea L, Giani Tagliabue S, Bonati L. Motta S, et al. Sci Rep. 2018 Nov 1;8(1):16207. doi: 10.1038/s41598-018-34373-z. Sci Rep. 2018. PMID: 30385820 Free PMC article.

7

Modeling the binding of diverse ligands within the Ah receptor ligand binding domain.

Giani Tagliabue S, Faber SC, Motta S, Denison MS, Bonati L. Giani Tagliabue S, et al. Among authors: motta s. Sci Rep. 2019 Jul 23;9(1):10693. doi: 10.1038/s41598-019-47138-z. Sci Rep. 2019. PMID: 31337850 Free PMC article.

8

NURA: A curated dataset of nuclear receptor modulators.

Valsecchi C, Grisoni F, Motta S, Bonati L, Ballabio D. Valsecchi C, et al. Among authors: motta s. Toxicol Appl Pharmacol. 2020 Nov 15;407:115244. doi: 10.1016/j.taap.2020.115244. Epub 2020 Sep 19. Toxicol Appl Pharmacol. 2020. PMID: 32961130

9

Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks.

Motta S, Pandini A, Fornili A, Bonati L. Motta S, et al. J Chem Theory Comput. 2021 Apr 13;17(4):2080-2089. doi: 10.1021/acs.jctc.0c01308. Epub 2021 Mar 29. J Chem Theory Comput. 2021. PMID: 33780250 Free PMC article.

10

Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process.

Callea L, Bonati L, Motta S. Callea L, et al. Among authors: motta s. J Chem Theory Comput. 2021 Jul 13;17(7):3841-3851. doi: 10.1021/acs.jctc.1c00114. Epub 2021 Jun 3. J Chem Theory Comput. 2021. PMID: 34082524 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

327 results

Search Page