Menzel P - Search Results

1

Discovering novel hydrolases from hot environments.

Wohlgemuth R, Littlechild J, Monti D, Schnorr K, van Rossum T, Siebers B, Menzel P, Kublanov IV, Rike AG, Skretas G, Szabo Z, Peng X, Young MJ. Wohlgemuth R, et al. Among authors: menzel p. Biotechnol Adv. 2018 Dec;36(8):2077-2100. doi: 10.1016/j.biotechadv.2018.09.004. Epub 2018 Sep 25. Biotechnol Adv. 2018. PMID: 30266344 Review.

2

Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs.

Menzel P, Gudbergsdóttir SR, Rike AG, Lin L, Zhang Q, Contursi P, Moracci M, Kristjansson JK, Bolduc B, Gavrilov S, Ravin N, Mardanov A, Bonch-Osmolovskaya E, Young M, Krogh A, Peng X. Menzel P, et al. Microb Ecol. 2015 Aug;70(2):411-24. doi: 10.1007/s00248-015-0576-9. Epub 2015 Feb 25. Microb Ecol. 2015. PMID: 25712554

3

Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs.

Gudbergsdóttir SR, Menzel P, Krogh A, Young M, Peng X. Gudbergsdóttir SR, et al. Among authors: menzel p. Environ Microbiol. 2016 Mar;18(3):863-74. doi: 10.1111/1462-2920.13079. Epub 2015 Dec 21. Environ Microbiol. 2016. PMID: 26439881

4

Isolation and Characterization of the First Xylanolytic Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1 and Its Unusual Multidomain Glycosidase.

Gavrilov SN, Stracke C, Jensen K, Menzel P, Kallnik V, Slesarev A, Sokolova T, Zayulina K, Bräsen C, Bonch-Osmolovskaya EA, Peng X, Kublanov IV, Siebers B. Gavrilov SN, et al. Among authors: menzel p. Front Microbiol. 2016 May 3;7:552. doi: 10.3389/fmicb.2016.00552. eCollection 2016. Front Microbiol. 2016. PMID: 27199905 Free PMC article.

5

Sugar Metabolism of the First Thermophilic Planctomycete Thermogutta terrifontis: Comparative Genomic and Transcriptomic Approaches.

Elcheninov AG, Menzel P, Gudbergsdottir SR, Slesarev AI, Kadnikov VV, Krogh A, Bonch-Osmolovskaya EA, Peng X, Kublanov IV. Elcheninov AG, et al. Among authors: menzel p. Front Microbiol. 2017 Nov 2;8:2140. doi: 10.3389/fmicb.2017.02140. eCollection 2017. Front Microbiol. 2017. PMID: 29163426 Free PMC article.

6

On the accuracy of short read mapping.

Menzel P, Frellsen J, Plass M, Rasmussen SH, Krogh A. Menzel P, et al. Methods Mol Biol. 2013;1038:39-59. doi: 10.1007/978-1-62703-514-9_3. Methods Mol Biol. 2013. PMID: 23872968

7

Fast and sensitive taxonomic classification for metagenomics with Kaiju.

Menzel P, Ng KL, Krogh A. Menzel P, et al. Nat Commun. 2016 Apr 13;7:11257. doi: 10.1038/ncomms11257. Nat Commun. 2016. PMID: 27071849 Free PMC article.

8

Transcriptional dynamics of microRNAs and their targets during Drosophila neurogenesis.

Menzel P, McCorkindale AL, Stefanov SR, Zinzen RP, Meyer IM. Menzel P, et al. RNA Biol. 2019 Jan;16(1):69-81. doi: 10.1080/15476286.2018.1558907. Epub 2019 Jan 20. RNA Biol. 2019. PMID: 30582411 Free PMC article.

9

Taxonomic classification method for metagenomics based on core protein families with Core-Kaiju.

Tovo A, Menzel P, Krogh A, Cosentino Lagomarsino M, Suweis S. Tovo A, et al. Among authors: menzel p. Nucleic Acids Res. 2020 Sep 18;48(16):e93. doi: 10.1093/nar/gkaa568. Nucleic Acids Res. 2020. PMID: 32633756 Free PMC article.

10

A gene expression atlas of embryonic neurogenesis in Drosophila reveals complex spatiotemporal regulation of lncRNAs.

McCorkindale AL, Wahle P, Werner S, Jungreis I, Menzel P, Shukla CJ, Abreu RLP, Irizarry RA, Meyer IM, Kellis M, Zinzen RP. McCorkindale AL, et al. Among authors: menzel p. Development. 2019 Mar 28;146(6):dev175265. doi: 10.1242/dev.175265. Development. 2019. PMID: 30923056 Free PMC article.

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