Meidanis J - Search Results

1

Median Approximations for Genomes Modeled as Matrices.

Zanetti JPP, Biller P, Meidanis J. Zanetti JPP, et al. Among authors: meidanis j. Bull Math Biol. 2016 Apr;78(4):786-814. doi: 10.1007/s11538-016-0162-4. Epub 2016 Apr 12. Bull Math Biol. 2016. PMID: 27072561

2

SCJ: a breakpoint-like distance that simplifies several rearrangement problems.

Feijão P, Meidanis J. Feijão P, et al. Among authors: meidanis j. IEEE/ACM Trans Comput Biol Bioinform. 2011 Sep-Oct;8(5):1318-29. doi: 10.1109/TCBB.2011.34. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 21339538

3

Rearrangement-based phylogeny using the Single-Cut-or-Join operation.

Biller P, Feijão P, Meidanis J. Biller P, et al. Among authors: meidanis j. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jan-Feb;10(1):122-34. doi: 10.1109/TCBB.2012.168. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 23702549

4

Extending the algebraic formalism for genome rearrangements to include linear chromosomes.

Feijão P, Meidanis J. Feijão P, et al. Among authors: meidanis j. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jul-Aug;10(4):819-31. doi: 10.1109/TCBB.2012.161. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 24334378

5

On the rank-distance median of 3 permutations.

Chindelevitch L, Pereira Zanetti JP, Meidanis J. Chindelevitch L, et al. Among authors: meidanis j. BMC Bioinformatics. 2018 May 8;19(Suppl 6):142. doi: 10.1186/s12859-018-2131-4. BMC Bioinformatics. 2018. PMID: 29745865 Free PMC article.

6

A lower bound on the reversal and transposition diameter.

Meidanis J, Walter MM, Dias Z. Meidanis J, et al. J Comput Biol. 2002;9(5):743-5. doi: 10.1089/106652702761034163. J Comput Biol. 2002. PMID: 12487761

7

A fully resolved consensus between fully resolved phylogenetic trees.

Quitzau JA, Meidanis J. Quitzau JA, et al. Among authors: meidanis j. Genet Mol Res. 2006 Mar 31;5(1):269-83. Genet Mol Res. 2006. PMID: 16755517 Free article.

8

A cubic algorithm for the generalized rank median of three genomes.

Chindelevitch L, La S, Meidanis J. Chindelevitch L, et al. Among authors: meidanis j. Algorithms Mol Biol. 2019 Jul 26;14:16. doi: 10.1186/s13015-019-0150-y. eCollection 2019. Algorithms Mol Biol. 2019. PMID: 31832081 Free PMC article.

9

Generalizations of the genomic rank distance to indels.

Pereira Zanetti JP, Peres Oliveira L, Chindelevitch L, Meidanis J. Pereira Zanetti JP, et al. Among authors: meidanis j. Bioinformatics. 2023 Mar 1;39(3):btad087. doi: 10.1093/bioinformatics/btad087. Bioinformatics. 2023. PMID: 36790056 Free PMC article.

10

Genome sequence and assembly of Bos indicus.

Canavez FC, Luche DD, Stothard P, Leite KR, Sousa-Canavez JM, Plastow G, Meidanis J, Souza MA, Feijao P, Moore SS, Camara-Lopes LH. Canavez FC, et al. Among authors: meidanis j. J Hered. 2012 May-Jun;103(3):342-8. doi: 10.1093/jhered/esr153. Epub 2012 Feb 7. J Hered. 2012. PMID: 22315242

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