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Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato.
Alonge M, Wang X, Benoit M, Soyk S, Pereira L, Zhang L, Suresh H, Ramakrishnan S, Maumus F, Ciren D, Levy Y, Harel TH, Shalev-Schlosser G, Amsellem Z, Razifard H, Caicedo AL, Tieman DM, Klee H, Kirsche M, Aganezov S, Ranallo-Benavidez TR, Lemmon ZH, Kim J, Robitaille G, Kramer M, Goodwin S, McCombie WR, Hutton S, Van Eck J, Gillis J, Eshed Y, Sedlazeck FJ, van der Knaap E, Schatz MC, Lippman ZB. Alonge M, et al. Among authors: mccombie wr. Cell. 2020 Jul 9;182(1):145-161.e23. doi: 10.1016/j.cell.2020.05.021. Epub 2020 Jun 17. Cell. 2020. PMID: 32553272 Free PMC article.
Role of transposable elements in heterochromatin and epigenetic control.
Lippman Z, Gendrel AV, Black M, Vaughn MW, Dedhia N, McCombie WR, Lavine K, Mittal V, May B, Kasschau KD, Carrington JC, Doerge RW, Colot V, Martienssen R. Lippman Z, et al. Among authors: mccombie wr. Nature. 2004 Jul 22;430(6998):471-6. doi: 10.1038/nature02651. Nature. 2004. PMID: 15269773
Epigenetic natural variation in Arabidopsis thaliana.
Vaughn MW, Tanurdzić M, Lippman Z, Jiang H, Carrasquillo R, Rabinowicz PD, Dedhia N, McCombie WR, Agier N, Bulski A, Colot V, Doerge RW, Martienssen RA. Vaughn MW, et al. Among authors: mccombie wr. PLoS Biol. 2007 Jul;5(7):e174. doi: 10.1371/journal.pbio.0050174. Epub 2007 Jun 19. PLoS Biol. 2007. PMID: 17579518 Free PMC article.
A comparative analysis of exome capture.
Parla JS, Iossifov I, Grabill I, Spector MS, Kramer M, McCombie WR. Parla JS, et al. Among authors: mccombie wr. Genome Biol. 2011 Sep 29;12(9):R97. doi: 10.1186/gb-2011-12-9-r97. Genome Biol. 2011. PMID: 21958622 Free PMC article.
De novo gene disruptions in children on the autistic spectrum.
Iossifov I, Ronemus M, Levy D, Wang Z, Hakker I, Rosenbaum J, Yamrom B, Lee YH, Narzisi G, Leotta A, Kendall J, Grabowska E, Ma B, Marks S, Rodgers L, Stepansky A, Troge J, Andrews P, Bekritsky M, Pradhan K, Ghiban E, Kramer M, Parla J, Demeter R, Fulton LL, Fulton RS, Magrini VJ, Ye K, Darnell JC, Darnell RB, Mardis ER, Wilson RK, Schatz MC, McCombie WR, Wigler M. Iossifov I, et al. Among authors: mccombie wr. Neuron. 2012 Apr 26;74(2):285-99. doi: 10.1016/j.neuron.2012.04.009. Neuron. 2012. PMID: 22542183 Free PMC article.
A hybrid likelihood model for sequence-based disease association studies.
Chen YC, Carter H, Parla J, Kramer M, Goes FS, Pirooznia M, Zandi PP, McCombie WR, Potash JB, Karchin R. Chen YC, et al. Among authors: mccombie wr. PLoS Genet. 2013;9(1):e1003224. doi: 10.1371/journal.pgen.1003224. Epub 2013 Jan 24. PLoS Genet. 2013. PMID: 23358228 Free PMC article.
Whole genome de novo assemblies of three divergent strains of rice, Oryza sativa, document novel gene space of aus and indica.
Schatz MC, Maron LG, Stein JC, Hernandez Wences A, Gurtowski J, Biggers E, Lee H, Kramer M, Antoniou E, Ghiban E, Wright MH, Chia JM, Ware D, McCouch SR, McCombie WR. Schatz MC, et al. Among authors: mccombie wr. Genome Biol. 2014;15(11):506. doi: 10.1186/PREACCEPT-2784872521277375. Genome Biol. 2014. PMID: 25468217 Free PMC article.
175 results