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BaMBa: towards the integrated management of Brazilian marine environmental data.
Meirelles PM, Gadelha LM Jr, Francini-Filho RB, de Moura RL, Amado-Filho GM, Bastos AC, Paranhos RP, Rezende CE, Swings J, Siegle E, Asp Neto NE, Leitão SN, Coutinho R, Mattoso M, Salomon PS, Valle RA, Pereira RC, Kruger RH, Thompson C, Thompson FL. Meirelles PM, et al. Among authors: mattoso m. Database (Oxford). 2015 Oct 10;2015:bav088. doi: 10.1093/database/bav088. Print 2015. Database (Oxford). 2015. PMID: 26454874 Free PMC article.
A new genomic taxonomy system for the Synechococcus collective.
Salazar VW, Tschoeke DA, Swings J, Cosenza CA, Mattoso M, Thompson CC, Thompson FL. Salazar VW, et al. Among authors: mattoso m. Environ Microbiol. 2020 Nov;22(11):4557-4570. doi: 10.1111/1462-2920.15173. Epub 2020 Aug 23. Environ Microbiol. 2020. PMID: 32700350
STINGRAY: system for integrated genomic resources and analysis.
Wagner G, Jardim R, Tschoeke DA, Loureiro DR, Ocaña KA, Ribeiro AC, Emmel VE, Probst CM, Pitaluga AN, Grisard EC, Cavalcanti MC, Campos ML, Mattoso M, Dávila AM. Wagner G, et al. Among authors: mattoso m. BMC Res Notes. 2014 Mar 7;7:132. doi: 10.1186/1756-0500-7-132. BMC Res Notes. 2014. PMID: 24606808 Free PMC article.
ProtozoaDB: dynamic visualization and exploration of protozoan genomes.
Dávila AM, Mendes PN, Wagner G, Tschoeke DA, Cuadrat RR, Liberman F, Matos L, Satake T, Ocaña KA, Triana O, Cruz SM, Jucá HC, Cury JC, Silva FN, Geronimo GA, Ruiz M, Ruback E, Silva FP Jr, Probst CM, Grisard EC, Krieger MA, Goldenberg S, Cavalcanti MC, Moraes MO, Campos ML, Mattoso M. Dávila AM, et al. Among authors: mattoso m. Nucleic Acids Res. 2008 Jan;36(Database issue):D547-52. doi: 10.1093/nar/gkm820. Epub 2007 Nov 2. Nucleic Acids Res. 2008. PMID: 17981844 Free PMC article.
Distributed in-memory data management for workflow executions.
Souza R, Silva V, Lima AAB, de Oliveira D, Valduriez P, Mattoso M. Souza R, et al. Among authors: mattoso m. PeerJ Comput Sci. 2021 May 7;7:e527. doi: 10.7717/peerj-cs.527. eCollection 2021. PeerJ Comput Sci. 2021. PMID: 34013039 Free PMC article.