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Signatures of selection in recently domesticated macadamia.
Lin J, Zhang W, Zhang X, Ma X, Zhang S, Chen S, Wang Y, Jia H, Liao Z, Lin J, Zhu M, Xu X, Cai M, Zeng H, Wan J, Yang W, Matsumoto T, Hardner C, Nock CJ, Ming R. Lin J, et al. Among authors: matsumoto t. Nat Commun. 2022 Jan 11;13(1):242. doi: 10.1038/s41467-021-27937-7. Nat Commun. 2022. PMID: 35017544 Free PMC article.
The bracteatus pineapple genome and domestication of clonally propagated crops.
Chen LY, VanBuren R, Paris M, Zhou H, Zhang X, Wai CM, Yan H, Chen S, Alonge M, Ramakrishnan S, Liao Z, Liu J, Lin J, Yue J, Fatima M, Lin Z, Zhang J, Huang L, Wang H, Hwa TY, Kao SM, Choi JY, Sharma A, Song J, Wang L, Yim WC, Cushman JC, Paull RE, Matsumoto T, Qin Y, Wu Q, Wang J, Yu Q, Wu J, Zhang S, Boches P, Tung CW, Wang ML, Coppens d'Eeckenbrugge G, Sanewski GM, Purugganan MD, Schatz MC, Bennetzen JL, Lexer C, Ming R. Chen LY, et al. Among authors: matsumoto t. Nat Genet. 2019 Oct;51(10):1549-1558. doi: 10.1038/s41588-019-0506-8. Epub 2019 Sep 30. Nat Genet. 2019. PMID: 31570895
Rambutan genome revealed gene networks for spine formation and aril development.
Zhang W, Lin J, Li J, Zheng S, Zhang X, Chen S, Ma X, Dong F, Jia H, Xu X, Yang Z, Ma P, Deng F, Deng B, Huang Y, Li Z, Lv X, Ma Y, Liao Z, Lin Z, Lin J, Zhang S, Matsumoto T, Xia R, Zhang J, Ming R. Zhang W, et al. Among authors: matsumoto t. Plant J. 2021 Nov;108(4):1037-1052. doi: 10.1111/tpj.15491. Epub 2021 Oct 13. Plant J. 2021. PMID: 34519122 Free article.
Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis.
Vieira P, Myers RY, Pellegrin C, Wram C, Hesse C, Maier TR, Shao J, Koutsovoulos GD, Zasada I, Matsumoto T, Danchin EGJ, Baum TJ, Eves-van den Akker S, Nemchinov LG. Vieira P, et al. Among authors: matsumoto t. PLoS Pathog. 2021 Nov 8;17(11):e1010036. doi: 10.1371/journal.ppat.1010036. eCollection 2021 Nov. PLoS Pathog. 2021. PMID: 34748609 Free PMC article.
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