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An international, interlaboratory ring trial confirms the feasibility of an extraction-less "direct" RT-qPCR method for reliable detection of SARS-CoV-2 RNA in clinical samples.
Mills MG, Bruce E, Huang ML, Crothers JW, Hyrien O, Oura CAL, Blake L, Brown Jordan A, Hester S, Wehmas L, Mari B, Barby P, Lacoux C, Fassy J, Vial P, Vial C, Martinez JRW, Oladipo OO, Inuwa B, Shittu I, Meseko CA, Chammas R, Santos CF, Dionísio TJ, Garbieri TF, Parisi VA, Mendes-Correa MC, de Paula AV, Romano CM, Góes LGB, Minoprio P, Campos AC, Cunha MP, Vilela APP, Nyirenda T, Mkakosya RS, Muula AS, Dumm RE, Harris RM, Mitchell CA, Pettit S, Botten J, Jerome KR. Mills MG, et al. Among authors: martinez jrw. PLoS One. 2022 Jan 13;17(1):e0261853. doi: 10.1371/journal.pone.0261853. eCollection 2022. PLoS One. 2022. PMID: 35025926 Free PMC article.
Antibiotic Consumption During the Coronavirus Disease 2019 Pandemic and Emergence of Carbapenemase-Producing Klebsiella pneumoniae Lineages Among Inpatients in a Chilean Hospital: A Time-Series Study and Phylogenomic Analysis.
Allel K, Peters A, Conejeros J, Martínez JRW, Spencer-Sandino M, Riquelme-Neira R, Rivas L, Rojas P, Orellana Chea C, García P, Araos R, McGovern O, Patel TS, Arias CA, Lessa FC, Undurraga EA, Munita JM. Allel K, et al. Among authors: martinez jrw. Clin Infect Dis. 2023 Jul 5;77(Suppl 1):S20-S28. doi: 10.1093/cid/ciad151. Clin Infect Dis. 2023. PMID: 37406053 Free PMC article.
Acquisition of resistance to ceftazidime-avibactam during infection treatment in Pseudomonas aeruginosa through D179Y mutation in one of two blaKPC-2 gene copies without losing carbapenem resistance.
García P, Brito B, Alcalde-Rico M, Munita JM, Martínez JRW, Olivares-Pacheco J, Quiroz V, Wozniak A. García P, et al. Among authors: martinez jrw. Front Cell Infect Microbiol. 2022 Sep 2;12:981792. doi: 10.3389/fcimb.2022.981792. eCollection 2022. Front Cell Infect Microbiol. 2022. PMID: 36118031 Free PMC article.
Molecular mechanisms leading to ceftolozane/tazobactam resistance in clinical isolates of Pseudomonas aeruginosa from five Latin American countries.
Mojica MF, De La Cadena E, Ríos R, García-Betancur JC, Díaz L, Reyes J, Hernández-Gómez C, Radice M, Gales AC, Castañeda Méndez P, Munita JM, Pallares CJ, Martínez JRW, Villegas MV. Mojica MF, et al. Among authors: martinez jrw. Front Microbiol. 2022 Oct 24;13:1035609. doi: 10.3389/fmicb.2022.1035609. eCollection 2022. Front Microbiol. 2022. PMID: 36353456 Free PMC article.
Dynamics of the MRSA Population in a Chilean Hospital: a Phylogenomic Analysis (2000-2016).
Martínez JRW, Planet PJ, Spencer-Sandino M, Rivas L, Díaz L, Moustafa AM, Quesille-Villalobos A, Riquelme-Neira R, Alcalde-Rico M, Hanson B, Carvajal LP, Rincón S, Reyes J, Lam M, Calderon JF, Araos R, García P, Arias CA, Munita JM. Martínez JRW, et al. Microbiol Spectr. 2023 Aug 17;11(4):e0535122. doi: 10.1128/spectrum.05351-22. Epub 2023 Jun 20. Microbiol Spectr. 2023. PMID: 37338398 Free PMC article.
Role of the multi-drug efflux systems on the baseline susceptibility to ceftazidime/avibactam and ceftolozane/tazobactam in clinical isolates of non-carbapenemase-producing carbapenem-resistant Pseudomonas aeruginosa.
Contreras-Gómez MJ, Martinez JRW, Rivas L, Riquelme-Neira R, Ugalde JA, Wozniak A, García P, Munita JM, Olivares-Pacheco J, Alcalde-Rico M. Contreras-Gómez MJ, et al. Among authors: martinez jrw. Front Pharmacol. 2022 Oct 3;13:1007162. doi: 10.3389/fphar.2022.1007162. eCollection 2022. Front Pharmacol. 2022. PMID: 36263116 Free PMC article.
Cefiderocol heteroresistance associated with mutations in TonB-dependent receptor genes in Pseudomonas aeruginosa of clinical origin.
Egge SL, Rizvi SA, Simar SR, Alcalde M, Martinez JRW, Hanson BM, Dinh AQ, Baptista RP, Tran TT, Shelburne SA, Munita JM, Arias CA, Hakki M, Miller WR. Egge SL, et al. Among authors: martinez jrw. bioRxiv [Preprint]. 2024 Jan 31:2024.01.30.578008. doi: 10.1101/2024.01.30.578008. bioRxiv. 2024. PMID: 38352536 Free PMC article. Preprint.
Real-World Performance of Susceptibility Testing for Ceftolozane/Tazobactam against Non-Carbapenemase-Producing Carbapenem-Resistant Pseudomonas aeruginosa.
Rivas L, Alcalde-Rico M, Martínez JRW, Moreno MV, Rojas P, Wozniak A, García P, Olivares-Pacheco J, Miller WR, Arias CA, Khan A, Munita JM. Rivas L, et al. Among authors: martinez jrw. Antimicrob Agents Chemother. 2022 Jan 18;66(1):e0165721. doi: 10.1128/AAC.01657-21. Epub 2021 Nov 15. Antimicrob Agents Chemother. 2022. PMID: 34780269 Free PMC article.
An international, interlaboratory ring trial confirms the feasibility of an open-source, extraction-less "direct" RT-qPCR method for reliable detection of SARS-CoV-2 RNA in clinical samples.
Mills MG, Bruce E, Huang ML, Crothers JW, Hyrien O, Oura CAL, Blake L, Jordan AB, Hester S, Wehmas L, Mari B, Barby P, Lacoux C, Fassy J, Vial P, Vial C, Martinez JRW, Oladipo OO, Inuwa B, Shittu I, Meseko CA, Chammas R, Santos CF, José Dionísio T, Garbieri TF, Parisi VA, Mendes-Correa MC, dePaula AV, Romano CM, Góes LGB, Minoprio P, Campos AC, Cunha MP, Vilela APP, Nyirenda T, Mkakosya RS, Muula AS, Dumm RE, Harris RM, Mitchell CA, Pettit S, Botten J, Jerome KR. Mills MG, et al. Among authors: martinez jrw. medRxiv [Preprint]. 2021 Apr 16:2021.04.10.21254091. doi: 10.1101/2021.04.10.21254091. medRxiv. 2021. PMID: 33880478 Free PMC article. Updated. Preprint.