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How many human proteoforms are there?
Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, Ivanov AR, Jensen ON, Jewett MC, Kelleher NL, Kiessling LL, Krogan NJ, Larsen MR, Loo JA, Ogorzalek Loo RR, Lundberg E, MacCoss MJ, Mallick P, Mootha VK, Mrksich M, Muir TW, Patrie SM, Pesavento JJ, Pitteri SJ, Rodriguez H, Saghatelian A, Sandoval W, Schlüter H, Sechi S, Slavoff SA, Smith LM, Snyder MP, Thomas PM, Uhlén M, Van Eyk JE, Vidal M, Walt DR, White FM, Williams ER, Wohlschlager T, Wysocki VH, Yates NA, Young NL, Zhang B. Aebersold R, et al. Among authors: mallick p. Nat Chem Biol. 2018 Feb 14;14(3):206-214. doi: 10.1038/nchembio.2576. Nat Chem Biol. 2018. PMID: 29443976 Free PMC article.
Scoring proteomes with proteotypic peptide probes.
Kuster B, Schirle M, Mallick P, Aebersold R. Kuster B, et al. Among authors: mallick p. Nat Rev Mol Cell Biol. 2005 Jul;6(7):577-83. doi: 10.1038/nrm1683. Nat Rev Mol Cell Biol. 2005. PMID: 15957003 Review.
Signal maps for mass spectrometry-based comparative proteomics.
Prakash A, Mallick P, Whiteaker J, Zhang H, Paulovich A, Flory M, Lee H, Aebersold R, Schwikowski B. Prakash A, et al. Among authors: mallick p. Mol Cell Proteomics. 2006 Mar;5(3):423-32. doi: 10.1074/mcp.M500133-MCP200. Epub 2005 Nov 3. Mol Cell Proteomics. 2006. PMID: 16269421 Free article.
The PeptideAtlas project.
Desiere F, Deutsch EW, King NL, Nesvizhskii AI, Mallick P, Eng J, Chen S, Eddes J, Loevenich SN, Aebersold R. Desiere F, et al. Among authors: mallick p. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D655-8. doi: 10.1093/nar/gkj040. Nucleic Acids Res. 2006. PMID: 16381952 Free PMC article.
The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.
Klimek J, Eddes JS, Hohmann L, Jackson J, Peterson A, Letarte S, Gafken PR, Katz JE, Mallick P, Lee H, Schmidt A, Ossola R, Eng JK, Aebersold R, Martin DB. Klimek J, et al. Among authors: mallick p. J Proteome Res. 2008 Jan;7(1):96-103. doi: 10.1021/pr070244j. Epub 2007 Aug 21. J Proteome Res. 2008. PMID: 17711323 Free PMC article.
203 results