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PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.
Olson ND, Wagner J, McDaniel J, Stephens SH, Westreich ST, Prasanna AG, Johanson E, Boja E, Maier EJ, Serang O, Jáspez D, Lorenzo-Salazar JM, Muñoz-Barrera A, Rubio-Rodríguez LA, Flores C, Kyriakidis K, Malousi A, Shafin K, Pesout T, Jain M, Paten B, Chang PC, Kolesnikov A, Nattestad M, Baid G, Goel S, Yang H, Carroll A, Eveleigh R, Bourgey M, Bourque G, Li G, Ma C, Tang L, Du Y, Zhang S, Morata J, Tonda R, Parra G, Trotta JR, Brueffer C, Demirkaya-Budak S, Kabakci-Zorlu D, Turgut D, Kalay Ö, Budak G, Narcı K, Arslan E, Brown R, Johnson IJ, Dolgoborodov A, Semenyuk V, Jain A, Tetikol HS, Jain V, Ruehle M, Lajoie B, Roddey C, Catreux S, Mehio R, Ahsan MU, Liu Q, Wang K, Sahraeian SME, Fang LT, Mohiyuddin M, Hung C, Jain C, Feng H, Li Z, Chen L, Sedlazeck FJ, Zook JM. Olson ND, et al. Among authors: maier ej. Cell Genom. 2022 May 11;2(5):100129. doi: 10.1016/j.xgen.2022.100129. Epub 2022 Apr 27. Cell Genom. 2022. PMID: 35720974 Free PMC article.
A community effort to identify and correct mislabeled samples in proteogenomic studies.
Yoo S, Shi Z, Wen B, Kho S, Pan R, Feng H, Chen H, Carlsson A, Edén P, Ma W, Raymer M, Maier EJ, Tezak Z, Johanson E, Hinton D, Rodriguez H, Zhu J, Boja E, Wang P, Zhang B. Yoo S, et al. Among authors: maier ej. Patterns (N Y). 2021 May 7;2(5):100245. doi: 10.1016/j.patter.2021.100245. eCollection 2021 May 14. Patterns (N Y). 2021. PMID: 34036290 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 38170871
Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA.
Gong B, Lababidi S, Kusko R, Bouri K, Prezek S, Thovarai V, Prasanna A, Maier EJ, Golkaram M, Sun X, Kyriakidis K, Kitajima JP, Ebrahim Sahraeian SM, Guo Y, Johanson E, Jones W, Tong W, Xu J. Gong B, et al. Among authors: maier ej. Sci Rep. 2024 Apr 8;14(1):8165. doi: 10.1038/s41598-024-58573-y. Sci Rep. 2024. PMID: 38589653 Free PMC article.
Synthetic Health Data Can Augment Community Research Efforts to Better Inform the Public During Emerging Pandemics.
Prasanna A, Jing B, Plopper G, Miller KK, Sanjak J, Feng A, Prezek S, Vidyaprakash E, Thovarai V, Maier EJ, Bhattacharya A, Naaman L, Stephens H, Watford S, Boscardin WJ, Johanson E, Lienau A. Prasanna A, et al. Among authors: maier ej. medRxiv [Preprint]. 2023 Dec 13:2023.12.11.23298687. doi: 10.1101/2023.12.11.23298687. medRxiv. 2023. PMID: 38168217 Free PMC article. Preprint.
Variants in SARS-CoV-2 associated with mild or severe outcome.
Voss JD, Skarzynski M, McAuley EM, Maier EJ, Gibbons T, Fries AC, Chapleau RR. Voss JD, et al. Among authors: maier ej. Evol Med Public Health. 2021 Jun 27;9(1):267-275. doi: 10.1093/emph/eoab019. eCollection 2021. Evol Med Public Health. 2021. PMID: 34447577 Free PMC article.
Enhancing trust in AI through industry self-governance.
Roski J, Maier EJ, Vigilante K, Kane EA, Matheny ME. Roski J, et al. Among authors: maier ej. J Am Med Inform Assoc. 2021 Jul 14;28(7):1582-1590. doi: 10.1093/jamia/ocab065. J Am Med Inform Assoc. 2021. PMID: 33895824 Free PMC article.
Seven-Up Is a Novel Regulator of Insulin Signaling.
Musselman LP, Fink JL, Maier EJ, Gatto JA, Brent MR, Baranski TJ. Musselman LP, et al. Among authors: maier ej. Genetics. 2018 Apr;208(4):1643-1656. doi: 10.1534/genetics.118.300770. Epub 2018 Feb 27. Genetics. 2018. PMID: 29487137 Free PMC article.
19 results