Lycett S - Search Results

1

Ecological and evolutionary dynamics of multi-strain RNA viruses.

Makau DN, Lycett S, Michalska-Smith M, Paploski IAD, Cheeran MC, Craft ME, Kao RR, Schroeder DC, Doeschl-Wilson A, VanderWaal K. Makau DN, et al. Among authors: lycett s. Nat Ecol Evol. 2022 Oct;6(10):1414-1422. doi: 10.1038/s41559-022-01860-6. Epub 2022 Sep 22. Nat Ecol Evol. 2022. PMID: 36138206 Review.

2

Supersize me: how whole-genome sequencing and big data are transforming epidemiology.

Kao RR, Haydon DT, Lycett SJ, Murcia PR. Kao RR, et al. Trends Microbiol. 2014 May;22(5):282-91. doi: 10.1016/j.tim.2014.02.011. Epub 2014 Mar 22. Trends Microbiol. 2014. PMID: 24661923 Free PMC article. Review.

3

Broadwick: a framework for computational epidemiology.

O'Hare A, Lycett SJ, Doherty T, Salvador LC, Kao RR. O'Hare A, et al. BMC Bioinformatics. 2016 Feb 4;17:65. doi: 10.1186/s12859-016-0903-2. BMC Bioinformatics. 2016. PMID: 26846686 Free PMC article.

4

Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis.

Trewby H, Wright D, Breadon EL, Lycett SJ, Mallon TR, McCormick C, Johnson P, Orton RJ, Allen AR, Galbraith J, Herzyk P, Skuce RA, Biek R, Kao RR. Trewby H, et al. Epidemics. 2016 Mar;14:26-35. doi: 10.1016/j.epidem.2015.08.003. Epub 2015 Oct 19. Epidemics. 2016. PMID: 26972511 Free PMC article.

5

Modelling the impact of co-circulating low pathogenic avian influenza viruses on epidemics of highly pathogenic avian influenza in poultry.

Nickbakhsh S, Hall MD, Dorigatti I, Lycett SJ, Mulatti P, Monne I, Fusaro A, Woolhouse MEJ, Rambaut A, Kao RR. Nickbakhsh S, et al. Among authors: lycett sj. Epidemics. 2016 Dec;17:27-34. doi: 10.1016/j.epidem.2016.10.005. Epub 2016 Oct 19. Epidemics. 2016. PMID: 27788412 Free article.

6

Using whole genome sequencing to investigate transmission in a multi-host system: bovine tuberculosis in New Zealand.

Crispell J, Zadoks RN, Harris SR, Paterson B, Collins DM, de-Lisle GW, Livingstone P, Neill MA, Biek R, Lycett SJ, Kao RR, Price-Carter M. Crispell J, et al. BMC Genomics. 2017 Feb 16;18(1):180. doi: 10.1186/s12864-017-3569-x. BMC Genomics. 2017. PMID: 28209138 Free PMC article.

7

Gene exchange drives the ecological success of a multi-host bacterial pathogen.

Richardson EJ, Bacigalupe R, Harrison EM, Weinert LA, Lycett S, Vrieling M, Robb K, Hoskisson PA, Holden MTG, Feil EJ, Paterson GK, Tong SYC, Shittu A, van Wamel W, Aanensen DM, Parkhill J, Peacock SJ, Corander J, Holmes M, Fitzgerald JR. Richardson EJ, et al. Among authors: lycett s. Nat Ecol Evol. 2018 Sep;2(9):1468-1478. doi: 10.1038/s41559-018-0617-0. Epub 2018 Jul 23. Nat Ecol Evol. 2018. PMID: 30038246 Free PMC article.

8

Predicting vaccine effectiveness in livestock populations: A theoretical framework applied to PRRS virus infections in pigs.

Bitsouni V, Lycett S, Opriessnig T, Doeschl-Wilson A. Bitsouni V, et al. Among authors: lycett s. PLoS One. 2019 Aug 30;14(8):e0220738. doi: 10.1371/journal.pone.0220738. eCollection 2019. PLoS One. 2019. PMID: 31469850 Free PMC article.

9

Combining genomics and epidemiology to analyse bi-directional transmission of Mycobacterium bovis in a multi-host system.

Crispell J, Benton CH, Balaz D, De Maio N, Ahkmetova A, Allen A, Biek R, Presho EL, Dale J, Hewinson G, Lycett SJ, Nunez-Garcia J, Skuce RA, Trewby H, Wilson DJ, Zadoks RN, Delahay RJ, Kao RR. Crispell J, et al. Elife. 2019 Dec 17;8:e45833. doi: 10.7554/eLife.45833. Elife. 2019. PMID: 31843054 Free PMC article.

10

Mycobacterium bovis genomics reveals transmission of infection between cattle and deer in Ireland.

Crispell J, Cassidy S, Kenny K, McGrath G, Warde S, Cameron H, Rossi G, MacWhite T, White PCL, Lycett S, Kao RR, Moriarty J, Gordon SV. Crispell J, et al. Among authors: lycett s. Microb Genom. 2020 Aug;6(8):mgen000388. doi: 10.1099/mgen.0.000388. Epub 2020 Jun 18. Microb Genom. 2020. PMID: 32553050 Free PMC article.

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