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A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.
Wylensek D, Hitch TCA, Riedel T, Afrizal A, Kumar N, Wortmann E, Liu T, Devendran S, Lesker TR, Hernández SB, Heine V, Buhl EM, M D'Agostino P, Cumbo F, Fischöder T, Wyschkon M, Looft T, Parreira VR, Abt B, Doden HL, Ly L, Alves JMP, Reichlin M, Flisikowski K, Suarez LN, Neumann AP, Suen G, de Wouters T, Rohn S, Lagkouvardos I, Allen-Vercoe E, Spröer C, Bunk B, Taverne-Thiele AJ, Giesbers M, Wells JM, Neuhaus K, Schnieke A, Cava F, Segata N, Elling L, Strowig T, Ridlon JM, Gulder TAM, Overmann J, Clavel T. Wylensek D, et al. Among authors: ly l. Nat Commun. 2020 Dec 15;11(1):6389. doi: 10.1038/s41467-020-19929-w. Nat Commun. 2020. PMID: 33319778 Free PMC article.
Clostridium scindens ATCC 35704: Integration of Nutritional Requirements, the Complete Genome Sequence, and Global Transcriptional Responses to Bile Acids.
Devendran S, Shrestha R, Alves JMP, Wolf PG, Ly L, Hernandez AG, Méndez-García C, Inboden A, Wiley J, Paul O, Allen A, Springer E, Wright CL, Fields CJ, Daniel SL, Ridlon JM. Devendran S, et al. Among authors: ly l. Appl Environ Microbiol. 2019 Mar 22;85(7):e00052-19. doi: 10.1128/AEM.00052-19. Print 2019 Apr 1. Appl Environ Microbiol. 2019. PMID: 30737348 Free PMC article.
The 'in vivo lifestyle' of bile acid 7α-dehydroxylating bacteria: comparative genomics, metatranscriptomic, and bile acid metabolomics analysis of a defined microbial community in gnotobiotic mice.
Ridlon JM, Devendran S, Alves JM, Doden H, Wolf PG, Pereira GV, Ly L, Volland A, Takei H, Nittono H, Murai T, Kurosawa T, Chlipala GE, Green SJ, Hernandez AG, Fields CJ, Wright CL, Kakiyama G, Cann I, Kashyap P, McCracken V, Gaskins HR. Ridlon JM, et al. Among authors: ly l. Gut Microbes. 2020 May 3;11(3):381-404. doi: 10.1080/19490976.2019.1618173. Epub 2019 Jun 9. Gut Microbes. 2020. PMID: 31177942 Free PMC article.
Bacterial steroid-17,20-desmolase is a taxonomically rare enzymatic pathway that converts prednisone to 1,4-androstanediene-3,11,17-trione, a metabolite that causes proliferation of prostate cancer cells.
Ly LK, Rowles JL 3rd, Paul HM, Alves JMP, Yemm C, Wolf PM, Devendran S, Hudson ME, Morris DJ, Erdman JW Jr, Ridlon JM. Ly LK, et al. J Steroid Biochem Mol Biol. 2020 May;199:105567. doi: 10.1016/j.jsbmb.2019.105567. Epub 2019 Dec 20. J Steroid Biochem Mol Biol. 2020. PMID: 31870912 Free PMC article.
Berberine alters gut microbial function through modulation of bile acids.
Wolf PG, Devendran S, Doden HL, Ly LK, Moore T, Takei H, Nittono H, Murai T, Kurosawa T, Chlipala GE, Green SJ, Kakiyama G, Kashyap P, McCracken VJ, Gaskins HR, Gillevet PM, Ridlon JM. Wolf PG, et al. Among authors: ly lk. BMC Microbiol. 2021 Jan 11;21(1):24. doi: 10.1186/s12866-020-02020-1. BMC Microbiol. 2021. PMID: 33430766 Free PMC article.
Gut feelings about bacterial steroid-17,20-desmolase.
Ly LK, Doden HL, Ridlon JM. Ly LK, et al. Mol Cell Endocrinol. 2021 Apr 5;525:111174. doi: 10.1016/j.mce.2021.111174. Epub 2021 Jan 24. Mol Cell Endocrinol. 2021. PMID: 33503463 Free PMC article. Review.
Formation of secondary allo-bile acids by novel enzymes from gut Firmicutes.
Lee JW, Cowley ES, Wolf PG, Doden HL, Murai T, Caicedo KYO, Ly LK, Sun F, Takei H, Nittono H, Daniel SL, Cann I, Gaskins HR, Anantharaman K, Alves JMP, Ridlon JM. Lee JW, et al. Among authors: ly lk. Gut Microbes. 2022 Jan-Dec;14(1):2132903. doi: 10.1080/19490976.2022.2132903. Gut Microbes. 2022. PMID: 36343662 Free PMC article.
273 results