Luong K - Search Results

1

Real-time DNA sequencing from single polymerase molecules.

Eid J, Fehr A, Gray J, Luong K, Lyle J, Otto G, Peluso P, Rank D, Baybayan P, Bettman B, Bibillo A, Bjornson K, Chaudhuri B, Christians F, Cicero R, Clark S, Dalal R, Dewinter A, Dixon J, Foquet M, Gaertner A, Hardenbol P, Heiner C, Hester K, Holden D, Kearns G, Kong X, Kuse R, Lacroix Y, Lin S, Lundquist P, Ma C, Marks P, Maxham M, Murphy D, Park I, Pham T, Phillips M, Roy J, Sebra R, Shen G, Sorenson J, Tomaney A, Travers K, Trulson M, Vieceli J, Wegener J, Wu D, Yang A, Zaccarin D, Zhao P, Zhong F, Korlach J, Turner S. Eid J, et al. Among authors: luong k. Science. 2009 Jan 2;323(5910):133-8. doi: 10.1126/science.1162986. Epub 2008 Nov 20. Science. 2009. PMID: 19023044

2

Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation.

Clark TA, Lu X, Luong K, Dai Q, Boitano M, Turner SW, He C, Korlach J. Clark TA, et al. Among authors: luong k. BMC Biol. 2013 Jan 22;11:4. doi: 10.1186/1741-7007-11-4. BMC Biol. 2013. PMID: 23339471 Free PMC article.

3

Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic.

Feng Z, Fang G, Korlach J, Clark T, Luong K, Zhang X, Wong W, Schadt E. Feng Z, et al. Among authors: luong k. PLoS Comput Biol. 2013;9(3):e1002935. doi: 10.1371/journal.pcbi.1002935. Epub 2013 Mar 14. PLoS Comput Biol. 2013. PMID: 23516341 Free PMC article.

4

A hybrid approach for the automated finishing of bacterial genomes.

Bashir A, Klammer A, Robins WP, Chin CS, Webster D, Paxinos E, Hsu D, Ashby M, Wang S, Peluso P, Sebra R, Sorenson J, Bullard J, Yen J, Valdovino M, Mollova E, Luong K, Lin S, LaMay B, Joshi A, Rowe L, Frace M, Tarr CL, Turnsek M, Davis BM, Kasarskis A, Mekalanos JJ, Waldor MK, Schadt EE. Bashir A, et al. Among authors: luong k. Nat Biotechnol. 2012 Jul 1;30(7):701-707. doi: 10.1038/nbt.2288. Nat Biotechnol. 2012. PMID: 22750883 Free PMC article.

5

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences.

Cao B, Chen C, DeMott MS, Cheng Q, Clark TA, Xiong X, Zheng X, Butty V, Levine SS, Yuan G, Boitano M, Luong K, Song Y, Zhou X, Deng Z, Turner SW, Korlach J, You D, Wang L, Chen S, Dedon PC. Cao B, et al. Among authors: luong k. Nat Commun. 2014 Jun 5;5:3951. doi: 10.1038/ncomms4951. Nat Commun. 2014. PMID: 24899568 Free PMC article.

6

Defining the sequence requirements for the positioning of base J in DNA using SMRT sequencing.

Genest PA, Baugh L, Taipale A, Zhao W, Jan S, van Luenen HG, Korlach J, Clark T, Luong K, Boitano M, Turner S, Myler PJ, Borst P. Genest PA, et al. Among authors: luong k. Nucleic Acids Res. 2015 Feb 27;43(4):2102-15. doi: 10.1093/nar/gkv095. Epub 2015 Feb 6. Nucleic Acids Res. 2015. PMID: 25662217 Free PMC article.

7

Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle.

Kozdon JB, Melfi MD, Luong K, Clark TA, Boitano M, Wang S, Zhou B, Gonzalez D, Collier J, Turner SW, Korlach J, Shapiro L, McAdams HH. Kozdon JB, et al. Among authors: luong k. Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):E4658-67. doi: 10.1073/pnas.1319315110. Epub 2013 Nov 11. Proc Natl Acad Sci U S A. 2013. PMID: 24218615 Free PMC article.

8

Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes.

Chen P, den Bakker HC, Korlach J, Kong N, Storey DB, Paxinos EE, Ashby M, Clark T, Luong K, Wiedmann M, Weimer BC. Chen P, et al. Among authors: luong k. Appl Environ Microbiol. 2017 Jan 17;83(3):e02091-16. doi: 10.1128/AEM.02091-16. Print 2017 Feb 1. Appl Environ Microbiol. 2017. PMID: 27836852 Free PMC article.

9

Identification of a Pseudomonas aeruginosa PAO1 DNA Methyltransferase, Its Targets, and Physiological Roles.

Doberenz S, Eckweiler D, Reichert O, Jensen V, Bunk B, Spröer C, Kordes A, Frangipani E, Luong K, Korlach J, Heeb S, Overmann J, Kaever V, Häussler S. Doberenz S, et al. Among authors: luong k. mBio. 2017 Feb 21;8(1):e02312-16. doi: 10.1128/mBio.02312-16. mBio. 2017. PMID: 28223461 Free PMC article.

10

The complex methylome of the human gastric pathogen Helicobacter pylori.

Krebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S. Krebes J, et al. Among authors: luong k. Nucleic Acids Res. 2014 Feb;42(4):2415-32. doi: 10.1093/nar/gkt1201. Epub 2013 Dec 2. Nucleic Acids Res. 2014. PMID: 24302578 Free PMC article.

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