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Complex Portal 2022: new curation frontiers.
Meldal BHM, Perfetto L, Combe C, Lubiana T, Ferreira Cavalcante JV, Bye-A-Jee H, Waagmeester A, Del-Toro N, Shrivastava A, Barrera E, Wong E, Mlecnik B, Bindea G, Panneerselvam K, Willighagen E, Rappsilber J, Porras P, Hermjakob H, Orchard S. Meldal BHM, et al. Among authors: lubiana t. Nucleic Acids Res. 2022 Jan 7;50(D1):D578-D586. doi: 10.1093/nar/gkab991. Nucleic Acids Res. 2022. PMID: 34718729 Free PMC article.
Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia.
Kilpatrick AM, Rahman F, Anjum A, Shome S, Andalib KMS, Banik S, Chowdhury SF, Coombe P, Astroz YC, Douglas JM, Eranti P, Kiran AD, Kumar S, Lim H, Lorenzi V, Lubiana T, Mahmud S, Puche R, Rybarczyk A, Al Sium SM, Twesigomwe D, Zok T, Orengo CA, Friedberg I, Kelso JF, Welch L. Kilpatrick AM, et al. Among authors: lubiana t. Bioinformatics. 2022 Jun 24;38(Suppl 1):i19-i27. doi: 10.1093/bioinformatics/btac236. Bioinformatics. 2022. PMID: 35758800 Free PMC article.
Characterization of Comments About bioRxiv and medRxiv Preprints.
Carneiro CFD, da Costa GG, Neves K, Abreu MB, Tan PB, Rayêe D, Boos FZ, Andrejew R, Lubiana T, Malicki M, Amaral OB. Carneiro CFD, et al. Among authors: lubiana t. JAMA Netw Open. 2023 Aug 1;6(8):e2331410. doi: 10.1001/jamanetworkopen.2023.31410. JAMA Netw Open. 2023. PMID: 37647065 Free PMC article.
Ten quick tips for harnessing the power of ChatGPT in computational biology.
Lubiana T, Lopes R, Medeiros P, Silva JC, Goncalves ANA, Maracaja-Coutinho V, Nakaya HI. Lubiana T, et al. PLoS Comput Biol. 2023 Aug 10;19(8):e1011319. doi: 10.1371/journal.pcbi.1011319. eCollection 2023 Aug. PLoS Comput Biol. 2023. PMID: 37561669 Free PMC article. No abstract available.
Ten quick tips for editing Wikidata.
Shafee T, Mietchen D, Lubiana T, Jemielniak D, Waagmeester A. Shafee T, et al. Among authors: lubiana t. PLoS Comput Biol. 2023 Jul 20;19(7):e1011235. doi: 10.1371/journal.pcbi.1011235. eCollection 2023 Jul. PLoS Comput Biol. 2023. PMID: 37471307 Free PMC article. No abstract available.
Unifying the identification of biomedical entities with the Bioregistry.
Hoyt CT, Balk M, Callahan TJ, Domingo-Fernández D, Haendel MA, Hegde HB, Himmelstein DS, Karis K, Kunze J, Lubiana T, Matentzoglu N, McMurry J, Moxon S, Mungall CJ, Rutz A, Unni DR, Willighagen E, Winston D, Gyori BM. Hoyt CT, et al. Among authors: lubiana t. Sci Data. 2022 Nov 19;9(1):714. doi: 10.1038/s41597-022-01807-3. Sci Data. 2022. PMID: 36402838 Free PMC article.
Using logical constraints to validate statistical information about disease outbreaks in collaborative knowledge graphs: the case of COVID-19 epidemiology in Wikidata.
Turki H, Jemielniak D, Hadj Taieb MA, Labra Gayo JE, Ben Aouicha M, Banat M, Shafee T, Prud'hommeaux E, Lubiana T, Das D, Mietchen D. Turki H, et al. Among authors: lubiana t. PeerJ Comput Sci. 2022 Sep 29;8:e1085. doi: 10.7717/peerj-cs.1085. eCollection 2022. PeerJ Comput Sci. 2022. PMID: 36262159 Free PMC article.
Correction for Rando et al., "Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure".
Rando HM, MacLean AL, Lee AJ, Lordan R, Ray S, Bansal V, Skelly AN, Sell E, Dziak JJ, Shinholster L, D'Agostino McGowan L, Ben Guebila M, Wellhausen N, Knyazev S, Boca SM, Capone S, Qi Y, Park Y, Mai D, Sun Y, Boerckel JD, Brueffer C, Byrd JB, Kamil JP, Wang J, Velazquez R, Szeto GL, Barton JP, Goel RR, Mangul S, Lubiana T; COVID-19 Review Consortium; Gitter A, Greene CS. Rando HM, et al. Among authors: lubiana t. mSystems. 2022 Feb 22;7(1):e0144721. doi: 10.1128/msystems.01447-21. Epub 2022 Jan 25. mSystems. 2022. PMID: 35076276 Free PMC article. No abstract available.
Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure.
Rando HM, MacLean AL, Lee AJ, Lordan R, Ray S, Bansal V, Skelly AN, Sell E, Dziak JJ, Shinholster L, D'Agostino McGowan L, Ben Guebila M, Wellhausen N, Knyazev S, Boca SM, Capone S, Qi Y, Park Y, Mai D, Sun Y, Boerckel JD, Brueffer C, Byrd JB, Kamil JP, Wang J, Velazquez R, Szeto GL, Barton JP, Goel RR, Mangul S, Lubiana T; COVID-19 Review Consortium Vikas Bansal, John P. Barton, Simina M. Boca, Joel D. Boerckel, Christian Brueffer, James Brian Byrd, Stephen Capone, Shikta Das, Anna Ada Dattoli, John J. Dziak, Jeffrey M. Field, Soumita Ghosh, Anthony Gitter, Rishi Raj Goel, Casey S. Greene, Marouen Ben Guebila, Daniel S. Himmelstein, Fengling Hu, Nafisa M. Jadavji, Jeremy P. Kamil, Sergey Knyazev, Likhitha Kolla, Alexandra J. Lee, Ronan Lordan, Tiago Lubiana, Temitayo Lukan, Adam L. MacLean, David Mai, Serghei Mangul, David Manheim, Lucy D’Agostino McGowan, Amruta Naik, YoSon Park, Dimitri Perrin, Yanjun Qi, Diane N. Rafizadeh, Bharath Ramsundar, Halie M. Rando, Sandipan Ray, Michael P. Robson, Vincent Rubinetti, Elizabeth Sell, Lamonica Shinholster, Ashwin N. Skelly, Yuchen Sun, Yusha Sun, Gregory L. Szeto, Ryan Velazquez, Jinhui Wang, Nils Wellhausen,; Gitter A, Greene CS. Rando HM, et al. Among authors: lubiana t. mSystems. 2021 Oct 26;6(5):e0009521. doi: 10.1128/mSystems.00095-21. Epub 2021 Oct 26. mSystems. 2021. PMID: 34698547 Free PMC article.
12 results