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Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays.
Chen A, Liao S, Cheng M, Ma K, Wu L, Lai Y, Qiu X, Yang J, Xu J, Hao S, Wang X, Lu H, Chen X, Liu X, Huang X, Li Z, Hong Y, Jiang Y, Peng J, Liu S, Shen M, Liu C, Li Q, Yuan Y, Wei X, Zheng H, Feng W, Wang Z, Liu Y, Wang Z, Yang Y, Xiang H, Han L, Qin B, Guo P, Lai G, Muñoz-Cánoves P, Maxwell PH, Thiery JP, Wu QF, Zhao F, Chen B, Li M, Dai X, Wang S, Kuang H, Hui J, Wang L, Fei JF, Wang O, Wei X, Lu H, Wang B, Liu S, Gu Y, Ni M, Zhang W, Mu F, Yin Y, Yang H, Lisby M, Cornall RJ, Mulder J, Uhlén M, Esteban MA, Li Y, Liu L, Xu X, Wang J. Chen A, et al. Among authors: lu h. Cell. 2022 May 12;185(10):1777-1792.e21. doi: 10.1016/j.cell.2022.04.003. Epub 2022 May 4. Cell. 2022. PMID: 35512705 Free article.
RED-ML: a novel, effective RNA editing detection method based on machine learning.
Xiong H, Liu D, Li Q, Lei M, Xu L, Wu L, Wang Z, Ren S, Li W, Xia M, Lu L, Lu H, Hou Y, Zhu S, Liu X, Sun Y, Wang J, Yang H, Wu K, Xu X, Lee LJ. Xiong H, et al. Among authors: lu h, lu l. Gigascience. 2017 May 1;6(5):1-8. doi: 10.1093/gigascience/gix012. Gigascience. 2017. PMID: 28328004 Free PMC article.
A reference human genome dataset of the BGISEQ-500 sequencer.
Huang J, Liang X, Xuan Y, Geng C, Li Y, Lu H, Qu S, Mei X, Chen H, Yu T, Sun N, Rao J, Wang J, Zhang W, Chen Y, Liao S, Jiang H, Liu X, Yang Z, Mu F, Gao S. Huang J, et al. Among authors: lu h. Gigascience. 2017 May 1;6(5):1-9. doi: 10.1093/gigascience/gix024. Gigascience. 2017. PMID: 28379488 Free PMC article.
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing.
Fang C, Zhong H, Lin Y, Chen B, Han M, Ren H, Lu H, Luber JM, Xia M, Li W, Stein S, Xu X, Zhang W, Drmanac R, Wang J, Yang H, Hammarström L, Kostic AD, Kristiansen K, Li J. Fang C, et al. Among authors: lu h. Gigascience. 2018 Mar 1;7(3):1-8. doi: 10.1093/gigascience/gix133. Gigascience. 2018. PMID: 29293960 Free PMC article.
Erratum to: A reference human genome dataset of the BGISEQ-500 sequencer.
Huang J, Liang X, Xuan Y, Geng C, Li Y, Lu H, Qu S, Mei X, Chen H, Yu T, Sun N, Rao J, Wang J, Zhang W, Chen Y, Liao S, Jiang H, Liu X, Yang Z, Mu F, Gao S. Huang J, et al. Among authors: lu h. Gigascience. 2018 Dec 1;7(12):giy144. doi: 10.1093/gigascience/giy144. Gigascience. 2018. PMID: 30500904 Free PMC article. No abstract available.
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity.
Liu L, Liu C, Quintero A, Wu L, Yuan Y, Wang M, Cheng M, Leng L, Xu L, Dong G, Li R, Liu Y, Wei X, Xu J, Chen X, Lu H, Chen D, Wang Q, Zhou Q, Lin X, Li G, Liu S, Wang Q, Wang H, Fink JL, Gao Z, Liu X, Hou Y, Zhu S, Yang H, Ye Y, Lin G, Chen F, Herrmann C, Eils R, Shang Z, Xu X. Liu L, et al. Among authors: lu h. Nat Commun. 2019 Jan 28;10(1):470. doi: 10.1038/s41467-018-08205-7. Nat Commun. 2019. PMID: 30692544 Free PMC article.
The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution.
Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, Chen X, Xu Q, Qin Y, Liu L, Bai J, Wang O, Tang J, Lu H, Shang Z, Wang B, Hu G, Zhao X, Zou Y, Chen A, Gong M, Zhang W, Lee SM, Li S, Liu J, Li Z, Lu Y, Sabir JSM, Sabir MJ, Khan M, Hajrah NH, Yin Y, Kristiansen K, Yang H, Wang J, Xu X, Liu X. Fan G, et al. Among authors: lu y, lu h. Mol Ecol Resour. 2019 Jul;19(4):944-956. doi: 10.1111/1755-0998.13003. Epub 2019 May 9. Mol Ecol Resour. 2019. PMID: 30735609
Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda.
Gui F, Lan T, Zhao Y, Guo W, Dong Y, Fang D, Liu H, Li H, Wang H, Hao R, Cheng X, Li Y, Yang P, Sahu SK, Chen Y, Cheng L, He S, Liu P, Fan G, Lu H, Hu G, Dong W, Chen B, Jiang Y, Zhang Y, Xu H, Lin F, Slippers B, Postma A, Jackson M, Abate BA, Tesfaye K, Demie AL, Bayeleygne MD, Degefu DT, Chen F, Kuria PK, Kinyua ZM, Liu TX, Yang H, Huang F, Liu X, Sheng J, Kang L. Gui F, et al. Among authors: lu h. Protein Cell. 2022 Jul;13(7):513-531. doi: 10.1007/s13238-020-00795-7. Epub 2020 Oct 27. Protein Cell. 2022. PMID: 33108584 Free PMC article.
Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce.
Wei T, van Treuren R, Liu X, Zhang Z, Chen J, Liu Y, Dong S, Sun P, Yang T, Lan T, Wang X, Xiong Z, Liu Y, Wei J, Lu H, Han S, Chen JC, Ni X, Wang J, Yang H, Xu X, Kuang H, van Hintum T, Liu X, Liu H. Wei T, et al. Among authors: lu h. Nat Genet. 2021 May;53(5):752-760. doi: 10.1038/s41588-021-00831-0. Epub 2021 Apr 12. Nat Genet. 2021. PMID: 33846635
Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets.
Han L, Lan T, Li D, Li H, Deng L, Peng Z, He S, Zhou Y, Han R, Li L, Lu Y, Lu H, Wang Q, Yang S, Zhu Y, Huang Y, Cheng X, Yu J, Wang Y, Sun H, Chai H, Yang H, Xu X, Lisby M, Liu Q, Kristiansen K, Liu H, Hou Z. Han L, et al. Among authors: lu y, lu h. Mol Ecol Resour. 2022 Feb;22(2):768-785. doi: 10.1111/1755-0998.13504. Epub 2021 Oct 28. Mol Ecol Resour. 2022. PMID: 34549895 Free PMC article.
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