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Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum.
Zhang Q, Qi Y, Pan H, Tang H, Wang G, Hua X, Wang Y, Lin L, Li Z, Li Y, Yu F, Yu Z, Huang Y, Wang T, Ma P, Dou M, Sun Z, Wang Y, Wang H, Zhang X, Yao W, Wang Y, Liu X, Wang M, Wang J, Deng Z, Xu J, Yang Q, Liu Z, Chen B, Zhang M, Ming R, Zhang J. Zhang Q, et al. Among authors: liu z, liu x. Nat Genet. 2022 Jun;54(6):885-896. doi: 10.1038/s41588-022-01084-1. Epub 2022 Jun 2. Nat Genet. 2022. PMID: 35654976
The genome sequence of the orchid Phalaenopsis equestris.
Cai J, Liu X, Vanneste K, Proost S, Tsai WC, Liu KW, Chen LJ, He Y, Xu Q, Bian C, Zheng Z, Sun F, Liu W, Hsiao YY, Pan ZJ, Hsu CC, Yang YP, Hsu YC, Chuang YC, Dievart A, Dufayard JF, Xu X, Wang JY, Wang J, Xiao XJ, Zhao XM, Du R, Zhang GQ, Wang M, Su YY, Xie GC, Liu GH, Li LQ, Huang LQ, Luo YB, Chen HH, Van de Peer Y, Liu ZJ. Cai J, et al. Among authors: liu zj, liu gh, liu x, liu kw, liu w. Nat Genet. 2015 Jan;47(1):65-72. doi: 10.1038/ng.3149. Epub 2014 Nov 24. Nat Genet. 2015. PMID: 25420146
The Apostasia genome and the evolution of orchids.
Zhang GQ, Liu KW, Li Z, Lohaus R, Hsiao YY, Niu SC, Wang JY, Lin YC, Xu Q, Chen LJ, Yoshida K, Fujiwara S, Wang ZW, Zhang YQ, Mitsuda N, Wang M, Liu GH, Pecoraro L, Huang HX, Xiao XJ, Lin M, Wu XY, Wu WL, Chen YY, Chang SB, Sakamoto S, Ohme-Takagi M, Yagi M, Zeng SJ, Shen CY, Yeh CM, Luo YB, Tsai WC, Van de Peer Y, Liu ZJ. Zhang GQ, et al. Among authors: liu zj, liu gh, liu kw. Nature. 2017 Sep 21;549(7672):379-383. doi: 10.1038/nature23897. Epub 2017 Sep 13. Nature. 2017. PMID: 28902843 Free PMC article.
The genomic floral language of rose.
Xu Q, Liu ZJ. Xu Q, et al. Nat Genet. 2018 Jun;50(6):770-771. doi: 10.1038/s41588-018-0141-9. Nat Genet. 2018. PMID: 29844433 No abstract available.
The Litsea genome and the evolution of the laurel family.
Chen YC, Li Z, Zhao YX, Gao M, Wang JY, Liu KW, Wang X, Wu LW, Jiao YL, Xu ZL, He WG, Zhang QY, Liang CK, Hsiao YY, Zhang DY, Lan SR, Huang L, Xu W, Tsai WC, Liu ZJ, Van de Peer Y, Wang YD. Chen YC, et al. Among authors: liu zj, liu kw. Nat Commun. 2020 Apr 3;11(1):1675. doi: 10.1038/s41467-020-15493-5. Nat Commun. 2020. PMID: 32245969 Free PMC article.
The Euscaphis japonica genome and the evolution of malvids.
Sun WH, Li Z, Xiang S, Ni L, Zhang D, Chen DQ, Qiu MY, Zhang QG, Xiao L, Din L, Li Y, Liao XY, Liu XD, Jiang YT, Zhang PL, Ni H, Wang Y, Yue YX, Wu X, Din XQ, Huang W, Wang ZW, Ma X, Liu B, Zou XX, Van de Peer Y, Liu ZJ, Zou SQ. Sun WH, et al. Among authors: liu zj, liu b, liu xd. Plant J. 2021 Dec;108(5):1382-1399. doi: 10.1111/tpj.15518. Epub 2021 Nov 5. Plant J. 2021. PMID: 34587334 Free PMC article.
The Cycas genome and the early evolution of seed plants.
Liu Y, Wang S, Li L, Yang T, Dong S, Wei T, Wu S, Liu Y, Gong Y, Feng X, Ma J, Chang G, Huang J, Yang Y, Wang H, Liu M, Xu Y, Liang H, Yu J, Cai Y, Zhang Z, Fan Y, Mu W, Sahu SK, Liu S, Lang X, Yang L, Li N, Habib S, Yang Y, Lindstrom AJ, Liang P, Goffinet B, Zaman S, Wegrzyn JL, Li D, Liu J, Cui J, Sonnenschein EC, Wang X, Ruan J, Xue JY, Shao ZQ, Song C, Fan G, Li Z, Zhang L, Liu J, Liu ZJ, Jiao Y, Wang XQ, Wu H, Wang E, Lisby M, Yang H, Wang J, Liu X, Xu X, Li N, Soltis PS, Van de Peer Y, Soltis DE, Gong X, Liu H, Zhang S. Liu Y, et al. Among authors: liu zj, liu j, liu x, liu h, liu m, liu s. Nat Plants. 2022 Apr;8(4):389-401. doi: 10.1038/s41477-022-01129-7. Epub 2022 Apr 18. Nat Plants. 2022. PMID: 35437001 Free PMC article.
A near-complete genome assembly of the allotetrapolyploid Cenchrus fungigraminus (JUJUNCAO) provides insights into its evolution and C4 photosynthesis.
Zheng H, Wang B, Hua X, Gao R, Wang Y, Zhang Z, Zhang Y, Mei J, Huang Y, Huang Y, Lin H, Zhang X, Lin D, Lan S, Liu Z, Lu G, Wang Z, Ming R, Zhang J, Lin Z. Zheng H, et al. Among authors: liu z. Plant Commun. 2023 Sep 11;4(5):100633. doi: 10.1016/j.xplc.2023.100633. Epub 2023 Jun 3. Plant Commun. 2023. PMID: 37271992 Free PMC article.
Diploid and tetraploid genomes of Acorus and the evolution of monocots.
Ma L, Liu KW, Li Z, Hsiao YY, Qi Y, Fu T, Tang GD, Zhang D, Sun WH, Liu DK, Li Y, Chen GZ, Liu XD, Liao XY, Jiang YT, Yu X, Hao Y, Huang J, Zhao XW, Ke S, Chen YY, Wu WL, Hsu JL, Lin YF, Huang MD, Li CY, Huang L, Wang ZW, Zhao X, Zhong WY, Peng DH, Ahmad S, Lan S, Zhang JS, Tsai WC, Van de Peer Y, Liu ZJ. Ma L, et al. Among authors: liu zj, liu dk, liu kw, liu xd. Nat Commun. 2023 Jun 20;14(1):3661. doi: 10.1038/s41467-023-38829-3. Nat Commun. 2023. PMID: 37339946 Free PMC article.
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