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Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps.
Belser C, Istace B, Denis E, Dubarry M, Baurens FC, Falentin C, Genete M, Berrabah W, Chèvre AM, Delourme R, Deniot G, Denoeud F, Duffé P, Engelen S, Lemainque A, Manzanares-Dauleux M, Martin G, Morice J, Noel B, Vekemans X, D'Hont A, Rousseau-Gueutin M, Barbe V, Cruaud C, Wincker P, Aury JM. Belser C, et al. Among authors: lemainque a. Nat Plants. 2018 Nov;4(11):879-887. doi: 10.1038/s41477-018-0289-4. Epub 2018 Nov 2. Nat Plants. 2018. PMID: 30390080
Genome assembly using Nanopore-guided long and error-free DNA reads.
Madoui MA, Engelen S, Cruaud C, Belser C, Bertrand L, Alberti A, Lemainque A, Wincker P, Aury JM. Madoui MA, et al. Among authors: lemainque a. BMC Genomics. 2015 Apr 20;16(1):327. doi: 10.1186/s12864-015-1519-z. BMC Genomics. 2015. PMID: 25927464 Free PMC article.
Long-read assembly of the Brassica napus reference genome Darmor-bzh.
Rousseau-Gueutin M, Belser C, Da Silva C, Richard G, Istace B, Cruaud C, Falentin C, Boideau F, Boutte J, Delourme R, Deniot G, Engelen S, de Carvalho JF, Lemainque A, Maillet L, Morice J, Wincker P, Denoeud F, Chèvre AM, Aury JM. Rousseau-Gueutin M, et al. Among authors: lemainque a. Gigascience. 2020 Dec 15;9(12):giaa137. doi: 10.1093/gigascience/giaa137. Gigascience. 2020. PMID: 33319912 Free PMC article.
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing.
Belser C, Baurens FC, Noel B, Martin G, Cruaud C, Istace B, Yahiaoui N, Labadie K, Hřibová E, Doležel J, Lemainque A, Wincker P, D'Hont A, Aury JM. Belser C, et al. Among authors: lemainque a. Commun Biol. 2021 Sep 7;4(1):1047. doi: 10.1038/s42003-021-02559-3. Commun Biol. 2021. PMID: 34493830 Free PMC article.
Genome evolution across 1,011 Saccharomyces cerevisiae isolates.
Peter J, De Chiara M, Friedrich A, Yue JX, Pflieger D, Bergström A, Sigwalt A, Barre B, Freel K, Llored A, Cruaud C, Labadie K, Aury JM, Istace B, Lebrigand K, Barbry P, Engelen S, Lemainque A, Wincker P, Liti G, Schacherer J. Peter J, et al. Among authors: lemainque a. Nature. 2018 Apr;556(7701):339-344. doi: 10.1038/s41586-018-0030-5. Epub 2018 Apr 11. Nature. 2018. PMID: 29643504 Free PMC article.
Oak genome reveals facets of long lifespan.
Plomion C, Aury JM, Amselem J, Leroy T, Murat F, Duplessis S, Faye S, Francillonne N, Labadie K, Le Provost G, Lesur I, Bartholomé J, Faivre-Rampant P, Kohler A, Leplé JC, Chantret N, Chen J, Diévart A, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Bogeat-Triboulot MB, Bouffaud ML, Brachi B, Chancerel E, Cohen D, Couloux A, Da Silva C, Dossat C, Ehrenmann F, Gaspin C, Grima-Pettenati J, Guichoux E, Hecker A, Herrmann S, Hugueney P, Hummel I, Klopp C, Lalanne C, Lascoux M, Lasserre E, Lemainque A, Desprez-Loustau ML, Luyten I, Madoui MA, Mangenot S, Marchal C, Maumus F, Mercier J, Michotey C, Panaud O, Picault N, Rouhier N, Rué O, Rustenholz C, Salin F, Soler M, Tarkka M, Velt A, Zanne AE, Martin F, Wincker P, Quesneville H, Kremer A, Salse J. Plomion C, et al. Among authors: lemainque a. Nat Plants. 2018 Jul;4(7):440-452. doi: 10.1038/s41477-018-0172-3. Epub 2018 Jun 18. Nat Plants. 2018. PMID: 29915331 Free PMC article.
47 results