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Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics.
Giacomoni F, Le Corguillé G, Monsoor M, Landi M, Pericard P, Pétéra M, Duperier C, Tremblay-Franco M, Martin JF, Jacob D, Goulitquer S, Thévenot EA, Caron C. Giacomoni F, et al. Among authors: le corguille g. Bioinformatics. 2015 May 1;31(9):1493-5. doi: 10.1093/bioinformatics/btu813. Epub 2014 Dec 19. Bioinformatics. 2015. PMID: 25527831 Free PMC article.
Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies.
Doré H, Guyet U, Leconte J, Farrant GK, Alric B, Ratin M, Ostrowski M, Ferrieux M, Brillet-Guéguen L, Hoebeke M, Siltanen J, Le Corguillé G, Corre E, Wincker P, Scanlan DJ, Eveillard D, Partensky F, Garczarek L. Doré H, et al. Among authors: le corguille g. ISME J. 2023 May;17(5):720-732. doi: 10.1038/s41396-023-01386-0. Epub 2023 Feb 25. ISME J. 2023. PMID: 36841901 Free PMC article.
Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics.
Guitton Y, Tremblay-Franco M, Le Corguillé G, Martin JF, Pétéra M, Roger-Mele P, Delabrière A, Goulitquer S, Monsoor M, Duperier C, Canlet C, Servien R, Tardivel P, Caron C, Giacomoni F, Thévenot EA. Guitton Y, et al. Among authors: le corguille g. Int J Biochem Cell Biol. 2017 Dec;93:89-101. doi: 10.1016/j.biocel.2017.07.002. Epub 2017 Jul 12. Int J Biochem Cell Biol. 2017. PMID: 28710041
The future of metabolomics in ELIXIR.
van Rijswijk M, Beirnaert C, Caron C, Cascante M, Dominguez V, Dunn WB, Ebbels TMD, Giacomoni F, Gonzalez-Beltran A, Hankemeier T, Haug K, Izquierdo-Garcia JL, Jimenez RC, Jourdan F, Kale N, Klapa MI, Kohlbacher O, Koort K, Kultima K, Le Corguillé G, Moreno P, Moschonas NK, Neumann S, O'Donovan C, Reczko M, Rocca-Serra P, Rosato A, Salek RM, Sansone SA, Satagopam V, Schober D, Shimmo R, Spicer RA, Spjuth O, Thévenot EA, Viant MR, Weber RJM, Willighagen EL, Zanetti G, Steinbeck C. van Rijswijk M, et al. Among authors: le corguille g. F1000Res. 2017 Sep 6;6:ELIXIR-1649. doi: 10.12688/f1000research.12342.2. eCollection 2017. F1000Res. 2017. PMID: 29043062 Free PMC article.
Community-Driven Data Analysis Training for Biology.
Batut B, Hiltemann S, Bagnacani A, Baker D, Bhardwaj V, Blank C, Bretaudeau A, Brillet-Guéguen L, Čech M, Chilton J, Clements D, Doppelt-Azeroual O, Erxleben A, Freeberg MA, Gladman S, Hoogstrate Y, Hotz HR, Houwaart T, Jagtap P, Larivière D, Le Corguillé G, Manke T, Mareuil F, Ramírez F, Ryan D, Sigloch FC, Soranzo N, Wolff J, Videm P, Wolfien M, Wubuli A, Yusuf D; Galaxy Training Network; Taylor J, Backofen R, Nekrutenko A, Grüning B. Batut B, et al. Among authors: le corguille g. Cell Syst. 2018 Jun 27;6(6):752-758.e1. doi: 10.1016/j.cels.2018.05.012. Cell Syst. 2018. PMID: 29953864 Free PMC article.
CyanoLyase: a database of phycobilin lyase sequences, motifs and functions.
Bretaudeau A, Coste F, Humily F, Garczarek L, Le Corguillé G, Six C, Ratin M, Collin O, Schluchter WM, Partensky F. Bretaudeau A, et al. Among authors: le corguille g. Nucleic Acids Res. 2013 Jan;41(Database issue):D396-401. doi: 10.1093/nar/gks1091. Epub 2012 Nov 21. Nucleic Acids Res. 2013. PMID: 23175607 Free PMC article.
Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803.
Guyet U, Nguyen NA, Doré H, Haguait J, Pittera J, Conan M, Ratin M, Corre E, Le Corguillé G, Brillet-Guéguen L, Hoebeke M, Six C, Steglich C, Siegel A, Eveillard D, Partensky F, Garczarek L. Guyet U, et al. Among authors: le corguille g. Front Microbiol. 2020 Jul 24;11:1707. doi: 10.3389/fmicb.2020.01707. eCollection 2020. Front Microbiol. 2020. PMID: 32793165 Free PMC article.
Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes.
Garczarek L, Guyet U, Doré H, Farrant GK, Hoebeke M, Brillet-Guéguen L, Bisch A, Ferrieux M, Siltanen J, Corre E, Le Corguillé G, Ratin M, Pitt FD, Ostrowski M, Conan M, Siegel A, Labadie K, Aury JM, Wincker P, Scanlan DJ, Partensky F. Garczarek L, et al. Among authors: le corguille g. Nucleic Acids Res. 2021 Jan 8;49(D1):D667-D676. doi: 10.1093/nar/gkaa958. Nucleic Acids Res. 2021. PMID: 33125079 Free PMC article.
Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria.
Doré H, Farrant GK, Guyet U, Haguait J, Humily F, Ratin M, Pitt FD, Ostrowski M, Six C, Brillet-Guéguen L, Hoebeke M, Bisch A, Le Corguillé G, Corre E, Labadie K, Aury JM, Wincker P, Choi DH, Noh JH, Eveillard D, Scanlan DJ, Partensky F, Garczarek L. Doré H, et al. Among authors: le corguille g. Front Microbiol. 2020 Sep 15;11:567431. doi: 10.3389/fmicb.2020.567431. eCollection 2020. Front Microbiol. 2020. PMID: 33042072 Free PMC article.
31 results