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De novo assembling and primary analysis of genome and transcriptome of gray whale Eschrichtius robustus.
BMC Evol Biol. 2017 Dec 28;17(Suppl 2):258. doi: 10.1186/s12862-017-1103-z.
BMC Evol Biol. 2017.
PMID: 29297306
Free PMC article.
Architectural proteins Pita, Zw5,and ZIPIC contain homodimerization domain and support specific long-range interactions in Drosophila.
Zolotarev N, Fedotova A, Kyrchanova O, Bonchuk A, Penin AA, Lando AS, Eliseeva IA, Kulakovskiy IV, Maksimenko O, Georgiev P.
Zolotarev N, et al. Among authors: lando as.
Nucleic Acids Res. 2016 Sep 6;44(15):7228-41. doi: 10.1093/nar/gkw371. Epub 2016 May 2.
Nucleic Acids Res. 2016.
PMID: 27137890
Free PMC article.
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Transcriptome profile of yeast reveals the essential role of PMA2 and uncharacterized gene YBR056W-A (MNC1) in adaptation to toxic manganese concentration.
Andreeva N, Kulakovskaya E, Zvonarev A, Penin A, Eliseeva I, Teterina A, Lando A, Kulakovskiy IV, Kulakovskaya T.
Andreeva N, et al.
Metallomics. 2017 Feb 22;9(2):175-182. doi: 10.1039/c6mt00210b.
Metallomics. 2017.
PMID: 28128390
Free article.
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Translatome and transcriptome analysis of TMA20 (MCT-1) and TMA64 (eIF2D) knockout yeast strains.
Makeeva DS, Lando AS, Anisimova A, Egorov AA, Logacheva MD, Penin AA, Andreev DE, Sinitcyn PG, Terenin IM, Shatsky IN, Kulakovskiy IV, Dmitriev SE.
Makeeva DS, et al. Among authors: lando as.
Data Brief. 2019 Feb 2;23:103701. doi: 10.1016/j.dib.2019.103701. eCollection 2019 Apr.
Data Brief. 2019.
PMID: 30815525
Free PMC article.
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LegNet: a best-in-class deep learning model for short DNA regulatory regions.
Penzar D, Nogina D, Noskova E, Zinkevich A, Meshcheryakov G, Lando A, Rafi AM, de Boer C, Kulakovskiy IV.
Penzar D, et al.
Bioinformatics. 2023 Aug 1;39(8):btad457. doi: 10.1093/bioinformatics/btad457.
Bioinformatics. 2023.
PMID: 37490428
Free PMC article.
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Evaluation and optimization of sequence-based gene regulatory deep learning models.
Rafi AM, Nogina D, Penzar D, Lee D, Lee D, Kim N, Kim S, Kim D, Shin Y, Kwak IY, Meshcheryakov G, Lando A, Zinkevich A, Kim BC, Lee J, Kang T, Vaishnav ED, Yadollahpour P; Random Promoter DREAM Challenge Consortium; Kim S, Albrecht J, Regev A, Gong W, Kulakovskiy IV, Meyer P, de Boer C.
Rafi AM, et al.
bioRxiv [Preprint]. 2024 Feb 17:2023.04.26.538471. doi: 10.1101/2023.04.26.538471.
bioRxiv. 2024.
PMID: 38405704
Free PMC article.
Preprint.
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