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Understanding metric-related pitfalls in image analysis validation.
Reinke A, Tizabi MD, Baumgartner M, Eisenmann M, Heckmann-Nötzel D, Kavur AE, Rädsch T, Sudre CH, Acion L, Antonelli M, Arbel T, Bakas S, Benis A, Buettner F, Cardoso MJ, Cheplygina V, Chen J, Christodoulou E, Cimini BA, Farahani K, Ferrer L, Galdran A, van Ginneken B, Glocker B, Godau P, Hashimoto DA, Hoffman MM, Huisman M, Isensee F, Jannin P, Kahn CE, Kainmueller D, Kainz B, Karargyris A, Kleesiek J, Kofler F, Kooi T, Kopp-Schneider A, Kozubek M, Kreshuk A, Kurc T, Landman BA, Litjens G, Madani A, Maier-Hein K, Martel AL, Meijering E, Menze B, Moons KGM, Müller H, Nichyporuk B, Nickel F, Petersen J, Rafelski SM, Rajpoot N, Reyes M, Riegler MA, Rieke N, Saez-Rodriguez J, Sánchez CI, Shetty S, Summers RM, Taha AA, Tiulpin A, Tsaftaris SA, Van Calster B, Varoquaux G, Yaniv ZR, Jäger PF, Maier-Hein L. Reinke A, et al. Among authors: kurc t. Nat Methods. 2024 Feb;21(2):182-194. doi: 10.1038/s41592-023-02150-0. Epub 2024 Feb 12. Nat Methods. 2024. PMID: 38347140 Review.
Managing and Querying Whole Slide Images.
Wang F, Oh TW, Vergara-Niedermayr C, Kurc T, Saltz J. Wang F, et al. Among authors: kurc t. Proc SPIE Int Soc Opt Eng. 2012 Feb 16;8319:83190J. doi: 10.1117/12.912388. Proc SPIE Int Soc Opt Eng. 2012. PMID: 22844574 Free PMC article.
The virtual microscope.
Catalyürek U, Beynon MD, Chang C, Kurc T, Sussman A, Saltz J. Catalyürek U, et al. Among authors: kurc t. IEEE Trans Inf Technol Biomed. 2003 Dec;7(4):230-48. doi: 10.1109/titb.2004.823952. IEEE Trans Inf Technol Biomed. 2003. PMID: 15000350
Keratin 17 modulates the immune topography of pancreatic cancer.
Delgado-Coka L, Horowitz M, Torrente-Goncalves M, Roa-Peña L, Leiton CV, Hasan M, Babu S, Fassler D, Oentoro J, Bai JK, Petricoin EF 3rd, Matrisian LM, Blais EM, Marchenko N, Allard FD, Jiang W, Larson B, Hendifar A, Chen C, Abousamra S, Samaras D, Kurc T, Saltz J, Escobar-Hoyos LF, Shroyer KR. Delgado-Coka L, et al. Among authors: kurc t. J Transl Med. 2024 May 10;22(1):443. doi: 10.1186/s12967-024-05252-1. J Transl Med. 2024. PMID: 38730319 Free PMC article.
HPC AND GRID COMPUTING FOR INTEGRATIVE BIOMEDICAL RESEARCH.
Kurc T, Hastings S, Kumar V, Langella S, Sharma A, Pan T, Oster S, Ervin D, Permar J, Narayanan S, Gil Y, Deelman E, Hall M, Saltz J. Kurc T, et al. Int J High Perform Comput Appl. 2009 Aug 1;23(3):252. doi: 10.1177/1094342009106192. Int J High Perform Comput Appl. 2009. PMID: 20107625 Free PMC article.
116 results