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Chemical-Mediated Microbial Interactions Can Reduce the Effectiveness of Time-Series-Based Inference of Ecological Interaction Networks.
Int J Environ Res Public Health. 2022 Jan 22;19(3):1228. doi: 10.3390/ijerph19031228.
Int J Environ Res Public Health. 2022.
PMID: 35162258
Free PMC article.
Dynamic Associations of Milk Components With the Infant Gut Microbiome and Fecal Metabolites in a Mother-Infant Model by Microbiome, NMR Metabolomic, and Time-Series Clustering Analyses.
Komatsu Y, Kumakura D, Seto N, Izumi H, Takeda Y, Ohnishi Y, Nakaoka S, Aizawa T.
Komatsu Y, et al. Among authors: kumakura d.
Front Nutr. 2022 Jan 7;8:813690. doi: 10.3389/fnut.2021.813690. eCollection 2021.
Front Nutr. 2022.
PMID: 35071301
Free PMC article.
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Genomic characterization of closely related species in the Rumoiensis clade infers ecogenomic signatures to non-marine environments.
Tanaka M, Kumakura D, Mino S, Doi H, Ogura Y, Hayashi T, Yumoto I, Cai M, Zhou YG, Gomez-Gil B, Araki T, Sawabe T.
Tanaka M, et al. Among authors: kumakura d.
Environ Microbiol. 2020 Aug;22(8):3205-3217. doi: 10.1111/1462-2920.15062. Epub 2020 May 22.
Environ Microbiol. 2020.
PMID: 32383332
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Disentangling the growth curve of microbial culture.
Kumakura D, Yamaguchi R, Hara A, Nakaoka S.
Kumakura D, et al.
J Theor Biol. 2023 Sep 21;573:111597. doi: 10.1016/j.jtbi.2023.111597. Epub 2023 Aug 19.
J Theor Biol. 2023.
PMID: 37598762
Free article.
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