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A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling.
Eché C, Iampietro C, Birbes C, Dréau A, Kuchly C, Di Franco A, Klopp C, Faraut T, Djebali S, Castinel A, Zytnicki M, Denis E, Boussaha M, Grohs C, Boichard D, Gaspin C, Milan D, Donnadieu C. Eché C, et al. Among authors: kuchly c. Sci Data. 2023 Jun 8;10(1):369. doi: 10.1038/s41597-023-02249-1. Sci Data. 2023. PMID: 37291142 Free PMC article.
Large-scale detection and characterization of interchromosomal rearrangements in normozoospermic bulls using massive genotype and phenotype data sets.
Jourdain J, Barasc H, Faraut T, Calgaro A, Bonnet N, Marcuzzo C, Suin A, Barbat A, Hozé C, Besnard F, Taussat S, Grohs C, Kuchly C, Iampietro C, Donnadieu C, Pinton A, Boichard D, Capitan A. Jourdain J, et al. Among authors: kuchly c. Genome Res. 2023 Jun;33(6):957-971. doi: 10.1101/gr.277787.123. Epub 2023 Jul 6. Genome Res. 2023. PMID: 37414574 Free PMC article.
Multi-genome comparisons reveal gain-and-loss evolution of the anti-Mullerian hormone receptor type 2 gene, an old master sex determining gene, in Percidae.
Kuhl H, Euclide PT, Klopp C, Cabau C, Zahm M, Roques C, Iampietro C, Kuchly C, Donnadieu C, Feron R, Parrinello H, Poncet C, Jaffrelo L, Confolent C, Wen M, Herpin A, Jouanno E, Bestin A, Haffray P, Morvezen R, de Almeida TR, Lecocq T, Schaerlinger B, Chardard D, Żarski D, Larson W, Postlethwait JH, Timirkhanov S, Kloas W, Wuertz S, Stöck M, Guiguen Y. Kuhl H, et al. Among authors: kuchly c. bioRxiv [Preprint]. 2023 Nov 16:2023.11.13.566804. doi: 10.1101/2023.11.13.566804. bioRxiv. 2023. PMID: 38014084 Free PMC article. Preprint.
Comparison of two molecular barcodes for the study of equine strongylid communities with amplicon sequencing.
Courtot É, Boisseau M, Dhorne-Pollet S, Serreau D, Gesbert A, Reigner F, Basiaga M, Kuzmina T, Lluch J, Annonay G, Kuchly C, Diekmann I, Krücken J, von Samson-Himmelstjerna G, Mach N, Sallé G. Courtot É, et al. Among authors: kuchly c. PeerJ. 2023 Apr 12;11:e15124. doi: 10.7717/peerj.15124. eCollection 2023. PeerJ. 2023. PMID: 37070089 Free PMC article.
A supernumerary "B-sex" chromosome drives male sex determination in the Pachón cavefish, Astyanax mexicanus.
Imarazene B, Du K, Beille S, Jouanno E, Feron R, Pan Q, Torres-Paz J, Lopez-Roques C, Castinel A, Gil L, Kuchly C, Donnadieu C, Parrinello H, Journot L, Cabau C, Zahm M, Klopp C, Pavlica T, Al-Rikabi A, Liehr T, Simanovsky SA, Bohlen J, Sember A, Perez J, Veyrunes F, Mueller TD, Postlethwait JH, Schartl M, Herpin A, Rétaux S, Guiguen Y. Imarazene B, et al. Among authors: kuchly c. Curr Biol. 2021 Nov 8;31(21):4800-4809.e9. doi: 10.1016/j.cub.2021.08.030. Epub 2021 Sep 7. Curr Biol. 2021. PMID: 34496222 Free PMC article.
Correction to: Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions.
Fraslin C, Dechamp N, Bernard M, Krieg F, Hervet C, Guyomard R, Esquerré D, Barbieri J, Kuchly C, Duchaud E, Boudinot P, Rochat T, Bernardet JF, Quillet E. Fraslin C, et al. Among authors: kuchly c. Genet Sel Evol. 2019 Mar 20;51(1):11. doi: 10.1186/s12711-019-0451-0. Genet Sel Evol. 2019. PMID: 30894115 Free PMC article.
Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions.
Fraslin C, Dechamp N, Bernard M, Krieg F, Hervet C, Guyomard R, Esquerré D, Barbieri J, Kuchly C, Duchaud E, Boudinot P, Rochat T, Bernardet JF, Quillet E. Fraslin C, et al. Among authors: kuchly c. Genet Sel Evol. 2018 Nov 16;50(1):60. doi: 10.1186/s12711-018-0431-9. Genet Sel Evol. 2018. PMID: 30445909 Free PMC article.
14 results