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Untangling introductions and persistence in COVID-19 resurgence in Europe.
Lemey P, Ruktanonchai N, Hong SL, Colizza V, Poletto C, Van den Broeck F, Gill MS, Ji X, Levasseur A, Oude Munnink BB, Koopmans M, Sadilek A, Lai S, Tatem AJ, Baele G, Suchard MA, Dellicour S. Lemey P, et al. Among authors: koopmans m. Nature. 2021 Jul;595(7869):713-717. doi: 10.1038/s41586-021-03754-2. Epub 2021 Jun 30. Nature. 2021. PMID: 34192736 Free PMC article.
Human norovirus transmission and evolution in a changing world.
de Graaf M, van Beek J, Koopmans MP. de Graaf M, et al. Among authors: koopmans mp. Nat Rev Microbiol. 2016 Jul;14(7):421-33. doi: 10.1038/nrmicro.2016.48. Epub 2016 May 23. Nat Rev Microbiol. 2016. PMID: 27211790 Review.
Widespread activity of multiple lineages of Usutu virus, western Europe, 2016.
Cadar D, Lühken R, van der Jeugd H, Garigliany M, Ziegler U, Keller M, Lahoreau J, Lachmann L, Becker N, Kik M, Oude Munnink BB, Bosch S, Tannich E, Linden A, Schmidt V, Koopmans MP, Rijks J, Desmecht D, Groschup MH, Reusken C, Schmidt-Chanasit J. Cadar D, et al. Among authors: koopmans mp. Euro Surveill. 2017 Jan 26;22(4):30452. doi: 10.2807/1560-7917.ES.2017.22.4.30452. Euro Surveill. 2017. PMID: 28181903 Free PMC article.
Virus genomes reveal factors that spread and sustained the Ebola epidemic.
Dudas G, Carvalho LM, Bedford T, Tatem AJ, Baele G, Faria NR, Park DJ, Ladner JT, Arias A, Asogun D, Bielejec F, Caddy SL, Cotten M, D'Ambrozio J, Dellicour S, Di Caro A, Diclaro JW, Duraffour S, Elmore MJ, Fakoli LS, Faye O, Gilbert ML, Gevao SM, Gire S, Gladden-Young A, Gnirke A, Goba A, Grant DS, Haagmans BL, Hiscox JA, Jah U, Kugelman JR, Liu D, Lu J, Malboeuf CM, Mate S, Matthews DA, Matranga CB, Meredith LW, Qu J, Quick J, Pas SD, Phan MVT, Pollakis G, Reusken CB, Sanchez-Lockhart M, Schaffner SF, Schieffelin JS, Sealfon RS, Simon-Loriere E, Smits SL, Stoecker K, Thorne L, Tobin EA, Vandi MA, Watson SJ, West K, Whitmer S, Wiley MR, Winnicki SM, Wohl S, Wölfel R, Yozwiak NL, Andersen KG, Blyden SO, Bolay F, Carroll MW, Dahn B, Diallo B, Formenty P, Fraser C, Gao GF, Garry RF, Goodfellow I, Günther S, Happi CT, Holmes EC, Kargbo B, Keïta S, Kellam P, Koopmans MPG, Kuhn JH, Loman NJ, Magassouba N, Naidoo D, Nichol ST, Nyenswah T, Palacios G, Pybus OG, Sabeti PC, Sall A, Ströher U, Wurie I, Suchard MA, Lemey P, Rambaut A. Dudas G, et al. Among authors: koopmans mpg. Nature. 2017 Apr 20;544(7650):309-315. doi: 10.1038/nature22040. Epub 2017 Apr 12. Nature. 2017. PMID: 28405027 Free PMC article.
Complete Genome Sequences of Six Measles Virus Strains.
Phan MVT, Schapendonk CME, Oude Munnink BB, Koopmans MPG, de Swart RL, Cotten M. Phan MVT, et al. Among authors: koopmans mpg. Genome Announc. 2018 Mar 29;6(13):e00184-18. doi: 10.1128/genomeA.00184-18. Genome Announc. 2018. PMID: 29599155 Free PMC article.
Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017-18.
Poen MJ, Venkatesh D, Bestebroer TM, Vuong O, Scheuer RD, Oude Munnink BB, de Meulder D, Richard M, Kuiken T, Koopmans MPG, Kelder L, Kim YJ, Lee YJ, Steensels M, Lambrecht B, Dan A, Pohlmann A, Beer M, Savic V, Brown IH, Fouchier RAM, Lewis NS. Poen MJ, et al. Among authors: koopmans mpg. Virus Evol. 2019 Apr 22;5(1):vez004. doi: 10.1093/ve/vez004. eCollection 2019 Jan. Virus Evol. 2019. PMID: 31024736 Free PMC article.
Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets.
Brinkmann A, Andrusch A, Belka A, Wylezich C, Höper D, Pohlmann A, Nordahl Petersen T, Lucas P, Blanchard Y, Papa A, Melidou A, Oude Munnink BB, Matthijnssens J, Deboutte W, Ellis RJ, Hansmann F, Baumgärtner W, van der Vries E, Osterhaus A, Camma C, Mangone I, Lorusso A, Marcacci M, Nunes A, Pinto M, Borges V, Kroneman A, Schmitz D, Corman VM, Drosten C, Jones TC, Hendriksen RS, Aarestrup FM, Koopmans M, Beer M, Nitsche A. Brinkmann A, et al. Among authors: koopmans m. J Clin Microbiol. 2019 Jul 26;57(8):e00466-19. doi: 10.1128/JCM.00466-19. Print 2019 Aug. J Clin Microbiol. 2019. PMID: 31167846 Free PMC article.
941 results