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Page 1
HAMAP in 2015: updates to the protein family classification and annotation system.
Pedruzzi I, Rivoire C, Auchincloss AH, Coudert E, Keller G, de Castro E, Baratin D, Cuche BA, Bougueleret L, Poux S, Redaschi N, Xenarios I, Bridge A. Pedruzzi I, et al. Among authors: keller g. Nucleic Acids Res. 2015 Jan;43(Database issue):D1064-70. doi: 10.1093/nar/gku1002. Epub 2014 Oct 27. Nucleic Acids Res. 2015. PMID: 25348399 Free PMC article.
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot.
Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A. Lima T, et al. Among authors: keller g. Nucleic Acids Res. 2009 Jan;37(Database issue):D471-8. doi: 10.1093/nar/gkn661. Epub 2008 Oct 11. Nucleic Acids Res. 2009. PMID: 18849571 Free PMC article.
UniPathway: a resource for the exploration and annotation of metabolic pathways.
Morgat A, Coissac E, Coudert E, Axelsen KB, Keller G, Bairoch A, Bridge A, Bougueleret L, Xenarios I, Viari A. Morgat A, et al. Among authors: keller g. Nucleic Acids Res. 2012 Jan;40(Database issue):D761-9. doi: 10.1093/nar/gkr1023. Epub 2011 Nov 18. Nucleic Acids Res. 2012. PMID: 22102589 Free PMC article.
The UniProt-GO Annotation database in 2011.
Dimmer EC, Huntley RP, Alam-Faruque Y, Sawford T, O'Donovan C, Martin MJ, Bely B, Browne P, Mun Chan W, Eberhardt R, Gardner M, Laiho K, Legge D, Magrane M, Pichler K, Poggioli D, Sehra H, Auchincloss A, Axelsen K, Blatter MC, Boutet E, Braconi-Quintaje S, Breuza L, Bridge A, Coudert E, Estreicher A, Famiglietti L, Ferro-Rojas S, Feuermann M, Gos A, Gruaz-Gumowski N, Hinz U, Hulo C, James J, Jimenez S, Jungo F, Keller G, Lemercier P, Lieberherr D, Masson P, Moinat M, Pedruzzi I, Poux S, Rivoire C, Roechert B, Schneider M, Stutz A, Sundaram S, Tognolli M, Bougueleret L, Argoud-Puy G, Cusin I, Duek-Roggli P, Xenarios I, Apweiler R. Dimmer EC, et al. Among authors: keller g. Nucleic Acids Res. 2012 Jan;40(Database issue):D565-70. doi: 10.1093/nar/gkr1048. Epub 2011 Nov 28. Nucleic Acids Res. 2012. PMID: 22123736 Free PMC article.
HAMAP in 2013, new developments in the protein family classification and annotation system.
Pedruzzi I, Rivoire C, Auchincloss AH, Coudert E, Keller G, de Castro E, Baratin D, Cuche BA, Bougueleret L, Poux S, Redaschi N, Xenarios I, Bridge A; UniProt Consortium. Pedruzzi I, et al. Among authors: keller g. Nucleic Acids Res. 2013 Jan;41(Database issue):D584-9. doi: 10.1093/nar/gks1157. Epub 2012 Nov 27. Nucleic Acids Res. 2013. PMID: 23193261 Free PMC article.
UniProt: a hub for protein information.
UniProt Consortium. UniProt Consortium. Nucleic Acids Res. 2015 Jan;43(Database issue):D204-12. doi: 10.1093/nar/gku989. Epub 2014 Oct 27. Nucleic Acids Res. 2015. PMID: 25348405 Free PMC article.
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase.
Gaudet P, Lane L, Fey P, Bridge A, Poux S, Auchincloss A, Axelsen K, Braconi Quintaje S, Boutet E, Brown P, Coudert E, Datta RS, de Lima WC, de Oliveira Lima T, Duvaud S, Farriol-Mathis N, Ferro Rojas S, Feuermann M, Gateau A, Hinz U, Hulo C, James J, Jimenez S, Jungo F, Keller G, Lemercier P, Lieberherr D, Moinat M, Nikolskaya A, Pedruzzi I, Rivoire C, Roechert B, Schneider M, Stanley E, Tognolli M, Sjölander K, Bougueleret L, Chisholm RL, Bairoch A. Gaudet P, et al. Among authors: keller g. Database (Oxford). 2009;2009:bap016. doi: 10.1093/database/bap016. Epub 2009 Oct 15. Database (Oxford). 2009. PMID: 20157489 Free PMC article.
The Gene Ontology: enhancements for 2011.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2012 Jan;40(Database issue):D559-64. doi: 10.1093/nar/gkr1028. Epub 2011 Nov 18. Nucleic Acids Res. 2012. PMID: 22102568 Free PMC article.
Gene Ontology annotations and resources.
Gene Ontology Consortium; Blake JA, Dolan M, Drabkin H, Hill DP, Li N, Sitnikov D, Bridges S, Burgess S, Buza T, McCarthy F, Peddinti D, Pillai L, Carbon S, Dietze H, Ireland A, Lewis SE, Mungall CJ, Gaudet P, Chrisholm RL, Fey P, Kibbe WA, Basu S, Siegele DA, McIntosh BK, Renfro DP, Zweifel AE, Hu JC, Brown NH, Tweedie S, Alam-Faruque Y, Apweiler R, Auchinchloss A, Axelsen K, Bely B, Blatter M-, Bonilla C, Bouguerleret L, Boutet E, Breuza L, Bridge A, Chan WM, Chavali G, Coudert E, Dimmer E, Estreicher A, Famiglietti L, Feuermann M, Gos A, Gruaz-Gumowski N, Hieta R, Hinz C, Hulo C, Huntley R, James J, Jungo F, Keller G, Laiho K, Legge D, Lemercier P, Lieberherr D, Magrane M, Martin MJ, Masson P, Mutowo-Muellenet P, O'Donovan C, Pedruzzi I, Pichler K, Poggioli D, Porras Millán P, Poux S, Rivoire C, Roechert B, Sawford T, Schneider M, Stutz A, Sundaram S, Tognolli M, Xenarios I, Foulgar R, Lomax J, Roncaglia P, Khodiyar VK, Lovering RC, Talmud PJ, Chibucos M, Giglio MG, Chang H-, Hunter S, McAnulla C, Mitchell A, Sangrador A, Stephan R, Harris MA, Oliver SG, Rutherford K, Wood V, Bahler J, Lock A, Kersey PJ, McDowall DM, Staines DM, Dwinell M, Shimoyama M, Laulederkind S, Ha… See abstract for full author list ➔ Gene Ontology Consortium, et al. Among authors: keller g. Nucleic Acids Res. 2013 Jan;41(Database issue):D530-5. doi: 10.1093/nar/gks1050. Epub 2012 Nov 17. Nucleic Acids Res. 2013. PMID: 23161678 Free PMC article.
947 results