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Phylogenetic distribution of plant snoRNA families.
Patra Bhattacharya D, Canzler S, Kehr S, Hertel J, Grosse I, Stadler PF. Patra Bhattacharya D, et al. Among authors: kehr s. BMC Genomics. 2016 Nov 24;17(1):969. doi: 10.1186/s12864-016-3301-2. BMC Genomics. 2016. PMID: 27881081 Free PMC article.
snoStrip: a snoRNA annotation pipeline.
Bartschat S, Kehr S, Tafer H, Stadler PF, Hertel J. Bartschat S, et al. Among authors: kehr s. Bioinformatics. 2014 Jan 1;30(1):115-6. doi: 10.1093/bioinformatics/btt604. Epub 2013 Oct 29. Bioinformatics. 2014. PMID: 24174566
Structured RNAs and synteny regions in the pig genome.
Anthon C, Tafer H, Havgaard JH, Thomsen B, Hedegaard J, Seemann SE, Pundhir S, Kehr S, Bartschat S, Nielsen M, Nielsen RO, Fredholm M, Stadler PF, Gorodkin J. Anthon C, et al. Among authors: kehr s. BMC Genomics. 2014 Jun 10;15(1):459. doi: 10.1186/1471-2164-15-459. BMC Genomics. 2014. PMID: 24917120 Free PMC article.
RNAsnoop: efficient target prediction for H/ACA snoRNAs.
Tafer H, Kehr S, Hertel J, Hofacker IL, Stadler PF. Tafer H, et al. Among authors: kehr s. Bioinformatics. 2010 Mar 1;26(5):610-6. doi: 10.1093/bioinformatics/btp680. Epub 2009 Dec 16. Bioinformatics. 2010. PMID: 20015949
PLEXY: efficient target prediction for box C/D snoRNAs.
Kehr S, Bartschat S, Stadler PF, Tafer H. Kehr S, et al. Bioinformatics. 2011 Jan 15;27(2):279-80. doi: 10.1093/bioinformatics/btq642. Epub 2010 Nov 13. Bioinformatics. 2011. PMID: 21076148
Conservation and losses of non-coding RNAs in avian genomes.
Gardner PP, Fasold M, Burge SW, Ninova M, Hertel J, Kehr S, Steeves TE, Griffiths-Jones S, Stadler PF. Gardner PP, et al. Among authors: kehr s. PLoS One. 2015 Mar 30;10(3):e0121797. doi: 10.1371/journal.pone.0121797. eCollection 2015. PLoS One. 2015. PMID: 25822729 Free PMC article.
An updated human snoRNAome.
Jorjani H, Kehr S, Jedlinski DJ, Gumienny R, Hertel J, Stadler PF, Zavolan M, Gruber AR. Jorjani H, et al. Among authors: kehr s. Nucleic Acids Res. 2016 Jun 20;44(11):5068-82. doi: 10.1093/nar/gkw386. Epub 2016 May 12. Nucleic Acids Res. 2016. PMID: 27174936 Free PMC article.
Animal snoRNAs and scaRNAs with exceptional structures.
Marz M, Gruber AR, Höner Zu Siederdissen C, Amman F, Badelt S, Bartschat S, Bernhart SH, Beyer W, Kehr S, Lorenz R, Tanzer A, Yusuf D, Tafer H, Hofacker IL, Stadler PF. Marz M, et al. Among authors: kehr s. RNA Biol. 2011 Nov-Dec;8(6):938-46. doi: 10.4161/rna.8.6.16603. Epub 2011 Nov 1. RNA Biol. 2011. PMID: 21955586 Free PMC article.
73 results