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222 results

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Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies.
Swanson L, Robertson G, Mungall KL, Butterfield YS, Chiu R, Corbett RD, Docking TR, Hogge D, Jackman SD, Moore RA, Mungall AJ, Nip KM, Parker JD, Qian JQ, Raymond A, Sung S, Tam A, Thiessen N, Varhol R, Wang S, Yorukoglu D, Zhao Y, Hoodless PA, Sahinalp SC, Karsan A, Birol I. Swanson L, et al. Among authors: karsan a. BMC Genomics. 2013 Aug 14;14:550. doi: 10.1186/1471-2164-14-550. BMC Genomics. 2013. PMID: 23941359 Free PMC article.
A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations.
Bosdet IE, Docking TR, Butterfield YS, Mungall AJ, Zeng T, Coope RJ, Yorida E, Chow K, Bala M, Young SS, Hirst M, Birol I, Moore RA, Jones SJ, Marra MA, Holt R, Karsan A. Bosdet IE, et al. Among authors: karsan a. J Mol Diagn. 2013 Nov;15(6):796-809. doi: 10.1016/j.jmoldx.2013.07.004. Epub 2013 Oct 4. J Mol Diagn. 2013. PMID: 24094589 Free article.
Kleat: cleavage site analysis of transcriptomes.
Birol I, Raymond A, Chiu R, Nip KM, Jackman SD, Kreitzman M, Docking TR, Ennis CA, Robertson AG, Karsan A. Birol I, et al. Among authors: karsan a. Pac Symp Biocomput. 2015:347-58. Pac Symp Biocomput. 2015. PMID: 25592595 Free PMC article.
Meis2 as a critical player in MN1-induced leukemia.
Lai CK, Norddahl GL, Maetzig T, Rosten P, Lohr T, Sanchez Milde L, von Krosigk N, Docking TR, Heuser M, Karsan A, Humphries RK. Lai CK, et al. Among authors: karsan a. Blood Cancer J. 2017 Sep 29;7(9):e613. doi: 10.1038/bcj.2017.86. Blood Cancer J. 2017. PMID: 28960191 Free PMC article.
Fixation Effects on Variant Calling in a Clinical Resequencing Panel.
Parker JDK, Yap SQ, Starks E, Slind J, Swanson L, Docking TR, Fuller M, Zhou C, Walker B, Filipenko D, Xiong W, Karimuddin AA, Phang PT, Raval M, Brown CJ, Karsan A. Parker JDK, et al. Among authors: karsan a. J Mol Diagn. 2019 Jul;21(4):705-717. doi: 10.1016/j.jmoldx.2019.03.005. Epub 2019 May 2. J Mol Diagn. 2019. PMID: 31055024 Free article.
Genomic testing in myeloid malignancy.
Docking TR, Karsan A. Docking TR, et al. Among authors: karsan a. Int J Lab Hematol. 2019 May;41 Suppl 1:117-125. doi: 10.1111/ijlh.13022. Int J Lab Hematol. 2019. PMID: 31069982 Review.
Sample Tracking Using Unique Sequence Controls.
Moore RA, Zeng T, Docking TR, Bosdet I, Butterfield YS, Munro S, Li I, Swanson L, Starks ER, Tse K, Mungall AJ, Holt RA, Karsan A. Moore RA, et al. Among authors: karsan a. J Mol Diagn. 2020 Feb;22(2):141-146. doi: 10.1016/j.jmoldx.2019.10.011. Epub 2019 Dec 16. J Mol Diagn. 2020. PMID: 31837431 Free article.
222 results