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PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.
Cell Genom. 2022 May 11;2(5):100129. doi: 10.1016/j.xgen.2022.100129. Epub 2022 Apr 27.
Cell Genom. 2022.
PMID: 35720974
Free PMC article.
Pan-African genome demonstrates how population-specific genome graphs improve high-throughput sequencing data analysis.
Tetikol HS, Turgut D, Narci K, Budak G, Kalay O, Arslan E, Demirkaya-Budak S, Dolgoborodov A, Kabakci-Zorlu D, Semenyuk V, Jain A, Davis-Dusenbery BN.
Tetikol HS, et al. Among authors: kalay o.
Nat Commun. 2022 Aug 4;13(1):4384. doi: 10.1038/s41467-022-31724-3.
Nat Commun. 2022.
PMID: 35927245
Free PMC article.
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Automated Identification of Germline de novo Mutations in Family Trios: A Consensus-Based Informatic Approach.
Shadrina M, Kalay Ö, Demirkaya-Budak S, LeDuc CA, Chung WK, Turgut D, Budak G, Arslan E, Semenyuk V, Davis-Dusenbery B, Seidman CE, Yost HJ, Jain A, Gelb BD.
Shadrina M, et al. Among authors: kalay o.
bioRxiv [Preprint]. 2024 Mar 13:2024.03.08.584100. doi: 10.1101/2024.03.08.584100.
bioRxiv. 2024.
PMID: 38559260
Free PMC article.
Preprint.
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The Effect of Hamatum Curvature Angle on Carpal Tunnel Volumetry: A Mathematical Simulation Model.
Alp NB, Kaleli T, Kalay OC, Karpat F, Akdag G, Macunluoglu AC, Oral GS.
Alp NB, et al. Among authors: kalay oc.
Comput Math Methods Med. 2020 Mar 10;2020:7582181. doi: 10.1155/2020/7582181. eCollection 2020.
Comput Math Methods Med. 2020.
PMID: 32617118
Free PMC article.
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Laser-Induced Microgrooves Improve the Mechanical Responses of Cemented Implant Systems.
Khandaker M, Ait Moussa A, Sama DN, Safavinia F, Hazra S, Kalay OC, Karpat F, Clary E, Haleem A.
Khandaker M, et al. Among authors: kalay oc.
Micromachines (Basel). 2020 Apr 29;11(5):466. doi: 10.3390/mi11050466.
Micromachines (Basel). 2020.
PMID: 32365464
Free PMC article.
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Understanding the causes behind coracoid graft osteolysıs in latarjet procedure (finite element analysis and comparison of three fixation methods).
Alp NB, Doğan O, Yılmaz TG, Kalay OC, Moussa AA, Karpat F, Khandaker M, Akdag G.
Alp NB, et al. Among authors: kalay oc.
Orthop Traumatol Surg Res. 2020 Feb;106(1):53-59. doi: 10.1016/j.otsr.2019.11.007. Epub 2019 Dec 13.
Orthop Traumatol Surg Res. 2020.
PMID: 31843510
Free article.
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