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Predicting HLA class II antigen presentation through integrated deep learning.
Chen B, Khodadoust MS, Olsson N, Wagar LE, Fast E, Liu CL, Muftuoglu Y, Sworder BJ, Diehn M, Levy R, Davis MM, Elias JE, Altman RB, Alizadeh AA. Chen B, et al. Nat Biotechnol. 2019 Nov;37(11):1332-1343. doi: 10.1038/s41587-019-0280-2. Epub 2019 Oct 14. Nat Biotechnol. 2019. PMID: 31611695 Free PMC article.
B-cell lymphomas present immunoglobulin neoantigens.
Khodadoust MS, Olsson N, Chen B, Sworder B, Shree T, Liu CL, Zhang L, Czerwinski DK, Davis MM, Levy R, Elias JE, Alizadeh AA. Khodadoust MS, et al. Blood. 2019 Feb 21;133(8):878-881. doi: 10.1182/blood-2018-06-845156. Epub 2018 Dec 13. Blood. 2019. PMID: 30545830 Free PMC article. No abstract available.