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reGenotyper: Detecting mislabeled samples in genetic data.
Zych K, Snoek BL, Elvin M, Rodriguez M, Van der Velde KJ, Arends D, Westra HJ, Swertz MA, Poulin G, Kammenga JE, Breitling R, Jansen RC, Li Y. Zych K, et al. Among authors: jansen rc. PLoS One. 2017 Feb 13;12(2):e0171324. doi: 10.1371/journal.pone.0171324. eCollection 2017. PLoS One. 2017. PMID: 28192439 Free PMC article.
WormQTL--public archive and analysis web portal for natural variation data in Caenorhabditis spp.
Snoek LB, Van der Velde KJ, Arends D, Li Y, Beyer A, Elvin M, Fisher J, Hajnal A, Hengartner MO, Poulin GB, Rodriguez M, Schmid T, Schrimpf S, Xue F, Jansen RC, Kammenga JE, Swertz MA. Snoek LB, et al. Among authors: jansen rc. Nucleic Acids Res. 2013 Jan;41(Database issue):D738-43. doi: 10.1093/nar/gks1124. Epub 2012 Nov 24. Nucleic Acids Res. 2013. PMID: 23180786 Free PMC article.
Mapping determinants of gene expression plasticity by genetical genomics in C. elegans.
Li Y, Alvarez OA, Gutteling EW, Tijsterman M, Fu J, Riksen JA, Hazendonk E, Prins P, Plasterk RH, Jansen RC, Breitling R, Kammenga JE. Li Y, et al. Among authors: jansen rc. PLoS Genet. 2006 Dec 29;2(12):e222. doi: 10.1371/journal.pgen.0020222. Epub 2006 Nov 13. PLoS Genet. 2006. PMID: 17196041 Free PMC article.
Sequence polymorphisms cause many false cis eQTLs.
Alberts R, Terpstra P, Li Y, Breitling R, Nap JP, Jansen RC. Alberts R, et al. Among authors: jansen rc. PLoS One. 2007 Jul 18;2(7):e622. doi: 10.1371/journal.pone.0000622. PLoS One. 2007. PMID: 17637838 Free PMC article.
R/qtl: high-throughput multiple QTL mapping.
Arends D, Prins P, Jansen RC, Broman KW. Arends D, et al. Among authors: jansen rc. Bioinformatics. 2010 Dec 1;26(23):2990-2. doi: 10.1093/bioinformatics/btq565. Epub 2010 Oct 21. Bioinformatics. 2010. PMID: 20966004 Free PMC article.
Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLA.
Fehrmann RS, Jansen RC, Veldink JH, Westra HJ, Arends D, Bonder MJ, Fu J, Deelen P, Groen HJ, Smolonska A, Weersma RK, Hofstra RM, Buurman WA, Rensen S, Wolfs MG, Platteel M, Zhernakova A, Elbers CC, Festen EM, Trynka G, Hofker MH, Saris CG, Ophoff RA, van den Berg LH, van Heel DA, Wijmenga C, Te Meerman GJ, Franke L. Fehrmann RS, et al. Among authors: jansen rc. PLoS Genet. 2011 Aug;7(8):e1002197. doi: 10.1371/journal.pgen.1002197. Epub 2011 Aug 4. PLoS Genet. 2011. PMID: 21829388 Free PMC article.
118 results