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Scaffolding pre-assembled contigs using SSPACE.
Boetzer M, Henkel CV, Jansen HJ, Butler D, Pirovano W. Boetzer M, et al. Among authors: jansen hj. Bioinformatics. 2011 Feb 15;27(4):578-9. doi: 10.1093/bioinformatics/btq683. Epub 2010 Dec 12. Bioinformatics. 2011. PMID: 21149342
Primitive duplicate Hox clusters in the European eel's genome.
Henkel CV, Burgerhout E, de Wijze DL, Dirks RP, Minegishi Y, Jansen HJ, Spaink HP, Dufour S, Weltzien FA, Tsukamoto K, van den Thillart GE. Henkel CV, et al. Among authors: jansen hj. PLoS One. 2012;7(2):e32231. doi: 10.1371/journal.pone.0032231. Epub 2012 Feb 24. PLoS One. 2012. PMID: 22384188 Free PMC article.
First draft genome sequence of the Japanese eel, Anguilla japonica.
Henkel CV, Dirks RP, de Wijze DL, Minegishi Y, Aoyama J, Jansen HJ, Turner B, Knudsen B, Bundgaard M, Hvam KL, Boetzer M, Pirovano W, Weltzien FA, Dufour S, Tsukamoto K, Spaink HP, van den Thillart GE. Henkel CV, et al. Among authors: jansen hj. Gene. 2012 Dec 15;511(2):195-201. doi: 10.1016/j.gene.2012.09.064. Epub 2012 Sep 29. Gene. 2012. PMID: 23026207 Free article.
Deep RNA sequencing of the skeletal muscle transcriptome in swimming fish.
Palstra AP, Beltran S, Burgerhout E, Brittijn SA, Magnoni LJ, Henkel CV, Jansen HJ, van den Thillart GE, Spaink HP, Planas JV. Palstra AP, et al. Among authors: jansen hj. PLoS One. 2013;8(1):e53171. doi: 10.1371/journal.pone.0053171. Epub 2013 Jan 8. PLoS One. 2013. PMID: 23308156 Free PMC article.
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system.
Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wüster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pla D, Sanz L, Hyder AS, Ribeiro JM, Arntzen JW, van den Thillart GE, Boetzer M, Pirovano W, Dirks RP, Spaink HP, Duboule D, McGlinn E, Kini RM, Richardson MK. Vonk FJ, et al. Among authors: jansen hj. Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20651-6. doi: 10.1073/pnas.1314702110. Epub 2013 Dec 2. Proc Natl Acad Sci U S A. 2013. PMID: 24297900 Free PMC article.
Changes in ovarian gene expression profiles and plasma hormone levels in maturing European eel (Anguilla anguilla); Biomarkers for broodstock selection.
Burgerhout E, Minegishi Y, Brittijn SA, de Wijze DL, Henkel CV, Jansen HJ, Spaink HP, Dirks RP, van den Thillart GEEJM. Burgerhout E, et al. Among authors: jansen hj. Gen Comp Endocrinol. 2016 Jan 1;225:185-196. doi: 10.1016/j.ygcen.2015.08.006. Epub 2015 Aug 6. Gen Comp Endocrinol. 2016. PMID: 26255685
A full-body transcriptome and proteome resource for the European common carp.
Kolder IC, van der Plas-Duivesteijn SJ, Tan G, Wiegertjes GF, Forlenza M, Guler AT, Travin DY, Nakao M, Moritomo T, Irnazarow I, den Dunnen JT, Anvar SY, Jansen HJ, Dirks RP, Palmblad M, Lenhard B, Henkel CV, Spaink HP. Kolder IC, et al. Among authors: jansen hj. BMC Genomics. 2016 Sep 2;17(1):701. doi: 10.1186/s12864-016-3038-y. BMC Genomics. 2016. PMID: 27590662 Free PMC article.
136 results