Ikeguchi M - Search Results

1

Structure of the small ubiquitin-like modifier (SUMO)-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3.

Sekiyama N, Ikegami T, Yamane T, Ikeguchi M, Uchimura Y, Baba D, Ariyoshi M, Tochio H, Saitoh H, Shirakawa M. Sekiyama N, et al. Among authors: ikeguchi m. J Biol Chem. 2008 Dec 19;283(51):35966-75. doi: 10.1074/jbc.M802528200. Epub 2008 Oct 7. J Biol Chem. 2008. PMID: 18842587 Free article.

2

Solution structure of the fibronectin type III domain from Bacillus circulans WL-12 chitinase A1.

Jee JG, Ikegami T, Hashimoto M, Kawabata T, Ikeguchi M, Watanabe T, Shirakawa M. Jee JG, et al. Among authors: ikeguchi m. J Biol Chem. 2002 Jan 11;277(2):1388-97. doi: 10.1074/jbc.M109726200. Epub 2001 Oct 12. J Biol Chem. 2002. PMID: 11600504 Free article.

3

A novel magnetic resonance-based method to measure gene expression in living cells.

Ki S, Sugihara F, Kasahara K, Tochio H, Okada-Marubayashi A, Tomita S, Morita M, Ikeguchi M, Shirakawa M, Kokubo T. Ki S, et al. Among authors: ikeguchi m. Nucleic Acids Res. 2006 Apr 5;34(6):e51. doi: 10.1093/nar/gkl135. Nucleic Acids Res. 2006. PMID: 16598072 Free PMC article.

4

Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment.

Yamane T, Okamura H, Ikeguchi M, Nishimura Y, Kidera A. Yamane T, et al. Among authors: ikeguchi m. Proteins. 2008 Jun;71(4):1970-83. doi: 10.1002/prot.21874. Proteins. 2008. PMID: 18186481

5

Structure and functional characterization of Vibrio parahaemolyticus thermostable direct hemolysin.

Yanagihara I, Nakahira K, Yamane T, Kaieda S, Mayanagi K, Hamada D, Fukui T, Ohnishi K, Kajiyama S, Shimizu T, Sato M, Ikegami T, Ikeguchi M, Honda T, Hashimoto H. Yanagihara I, et al. Among authors: ikeguchi m. J Biol Chem. 2010 May 21;285(21):16267-74. doi: 10.1074/jbc.M109.074526. Epub 2010 Mar 24. J Biol Chem. 2010. PMID: 20335168 Free PMC article.

6

Side-chain conformational changes of transcription factor PhoB upon DNA binding: a population-shift mechanism.

Yamane T, Okamura H, Nishimura Y, Kidera A, Ikeguchi M. Yamane T, et al. Among authors: ikeguchi m. J Am Chem Soc. 2010 Sep 15;132(36):12653-9. doi: 10.1021/ja103218x. J Am Chem Soc. 2010. PMID: 20722414

7

Fission yeast Swi5-Sfr1 protein complex, an activator of Rad51 recombinase, forms an extremely elongated dogleg-shaped structure.

Kokabu Y, Murayama Y, Kuwabara N, Oroguchi T, Hashimoto H, Tsutsui Y, Nozaki N, Akashi S, Unzai S, Shimizu T, Iwasaki H, Sato M, Ikeguchi M. Kokabu Y, et al. Among authors: ikeguchi m. J Biol Chem. 2011 Dec 16;286(50):43569-76. doi: 10.1074/jbc.M111.303339. Epub 2011 Oct 27. J Biol Chem. 2011. PMID: 22033972 Free PMC article.

8

Characterization of experimentally determined native-structure models of a protein using energetic and entropic components of free-energy function.

Mishima H, Yasuda S, Yoshidome T, Oshima H, Harano Y, Ikeguchi M, Kinoshita M. Mishima H, et al. Among authors: ikeguchi m. J Phys Chem B. 2012 Jul 12;116(27):7776-86. doi: 10.1021/jp301541z. Epub 2012 Jun 29. J Phys Chem B. 2012. PMID: 22697465

9

Functional rotation induced by alternating protonation states in the multidrug transporter AcrB: all-atom molecular dynamics simulations.

Yamane T, Murakami S, Ikeguchi M. Yamane T, et al. Among authors: ikeguchi m. Biochemistry. 2013 Oct 29;52(43):7648-58. doi: 10.1021/bi400119v. Epub 2013 Oct 18. Biochemistry. 2013. PMID: 24083838

10

Solution structure of the isolated histone H2A-H2B heterodimer.

Moriwaki Y, Yamane T, Ohtomo H, Ikeguchi M, Kurita J, Sato M, Nagadoi A, Shimojo H, Nishimura Y. Moriwaki Y, et al. Among authors: ikeguchi m. Sci Rep. 2016 May 16;6:24999. doi: 10.1038/srep24999. Sci Rep. 2016. PMID: 27181506 Free PMC article.

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