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The phylodynamics of SARS-CoV-2 during 2020 in Finland.
Truong Nguyen P, Kant R, Van den Broeck F, Suvanto MT, Alburkat H, Virtanen J, Ahvenainen E, Castren R, Hong SL, Baele G, Ahava MJ, Jarva H, Jokiranta ST, Kallio-Kokko H, Kekäläinen E, Kirjavainen V, Kortela E, Kurkela S, Lappalainen M, Liimatainen H, Suchard MA, Hannula S, Ellonen P, Sironen T, Lemey P, Vapalahti O, Smura T. Truong Nguyen P, et al. Among authors: hong sl. Commun Med (Lond). 2022 Jun 10;2:65. doi: 10.1038/s43856-022-00130-7. eCollection 2022. Commun Med (Lond). 2022. PMID: 35698660 Free PMC article.
A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Dellicour S, Durkin K, Hong SL, Vanmechelen B, Martí-Carreras J, Gill MS, Meex C, Bontems S, André E, Gilbert M, Walker C, Maio N, Faria NR, Hadfield J, Hayette MP, Bours V, Wawina-Bokalanga T, Artesi M, Baele G, Maes P. Dellicour S, et al. Among authors: hong sl. Mol Biol Evol. 2021 Apr 13;38(4):1608-1613. doi: 10.1093/molbev/msaa284. Mol Biol Evol. 2021. PMID: 33316043 Free PMC article.
SARS-CoV-2 European resurgence foretold: interplay of introductions and persistence by leveraging genomic and mobility data.
Lemey P, Ruktanonchai N, Hong SL, Colizza V, Poletto C, Van den Broeck F, Gill MS, Ji X, Levasseur A, Sadilek A, Lai S, Tatem AJ, Baele G, Suchard MA, Dellicour S. Lemey P, et al. Among authors: hong sl. Res Sq [Preprint]. 2021 Feb 10:rs.3.rs-208849. doi: 10.21203/rs.3.rs-208849/v1. Res Sq. 2021. PMID: 33594355 Free PMC article. Updated. Preprint.
Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City.
Dellicour S, Hong SL, Vrancken B, Chaillon A, Gill MS, Maurano MT, Ramaswami S, Zappile P, Marier C, Harkins GW, Baele G, Duerr R, Heguy A. Dellicour S, et al. Among authors: hong sl. PLoS Pathog. 2021 May 20;17(5):e1009571. doi: 10.1371/journal.ppat.1009571. eCollection 2021 May. PLoS Pathog. 2021. PMID: 34015049 Free PMC article.
Untangling introductions and persistence in COVID-19 resurgence in Europe.
Lemey P, Ruktanonchai N, Hong SL, Colizza V, Poletto C, Van den Broeck F, Gill MS, Ji X, Levasseur A, Oude Munnink BB, Koopmans M, Sadilek A, Lai S, Tatem AJ, Baele G, Suchard MA, Dellicour S. Lemey P, et al. Among authors: hong sl. Nature. 2021 Jul;595(7869):713-717. doi: 10.1038/s41586-021-03754-2. Epub 2021 Jun 30. Nature. 2021. PMID: 34192736 Free PMC article.
Variant Analysis of SARS-CoV-2 Genomes from Belgian Military Personnel Engaged in Overseas Missions and Operations.
Pirnay JP, Selhorst P, Hong SL, Cochez C, Potter B, Maes P, Petrillo M, Dudas G, Claes V, Van der Beken Y, Verbeken G, Degueldre J, Dellicour S, Cuypers L, T'Sas F, Van den Eede G, Verhasselt B, Weuts W, Smets C, Mertens J, Geeraerts P, Ariën KK, André E, Neirinckx P, Soentjens P, Baele G. Pirnay JP, et al. Among authors: hong sl. Viruses. 2021 Jul 13;13(7):1359. doi: 10.3390/v13071359. Viruses. 2021. PMID: 34372565 Free PMC article.
221 results