Holstege FCP - Search Results

1

Implementation of paediatric precision oncology into clinical practice: The Individualized Therapies for Children with cancer program 'iTHER'.

Langenberg KPS, Meister MT, Bakhuizen JJ, Boer JM, van Eijkelenburg NKA, Hulleman E, Ilan U, Looze EJ, Dierselhuis MP, van der Lugt J, Breunis W, Schild LG, Ober K, van Hooff SR, Scheijde-Vermeulen MA, Hiemcke-Jiwa LS, Flucke UE, Kranendonk MEG, Wesseling P, Sonneveld E, Punt S, Boltjes A, van Dijk F, Verwiel ETP, Volckmann R, Hehir-Kwa JY, Kester LA, Koudijs MMJ, Waanders E, Holstege FCP, Vormoor HJ, Hoving EW, van Noesel MM, Pieters R, Kool M, Stumpf M, Blattner-Johnson M, Balasubramanian GP, Van Tilburg CM, Jones BC, Jones DTW, Witt O, Pfister SM, Jongmans MCJ, Kuiper RP, de Krijger RR, Wijnen MHW, den Boer ML, Zwaan CM, Kemmeren P, Koster J, Tops BBJ, Goemans BF, Molenaar JJ. Langenberg KPS, et al. Among authors: holstege fcp. Eur J Cancer. 2022 Nov;175:311-325. doi: 10.1016/j.ejca.2022.09.001. Epub 2022 Sep 29. Eur J Cancer. 2022. PMID: 36182817 Free PMC article.

2

Integrating functional genomics data.

Kemmeren P, Holstege FC. Kemmeren P, et al. Biochem Soc Trans. 2003 Dec;31(Pt 6):1484-7. doi: 10.1042/bst0311484. Biochem Soc Trans. 2003. PMID: 14641095 Review.

3

Predicting gene function through systematic analysis and quality assessment of high-throughput data.

Kemmeren P, Kockelkorn TT, Bijma T, Donders R, Holstege FC. Kemmeren P, et al. Bioinformatics. 2005 Apr 15;21(8):1644-52. doi: 10.1093/bioinformatics/bti103. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531615

4

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

Radonjic M, Andrau JC, Lijnzaad P, Kemmeren P, Kockelkorn TT, van Leenen D, van Berkum NL, Holstege FC. Radonjic M, et al. Mol Cell. 2005 Apr 15;18(2):171-83. doi: 10.1016/j.molcel.2005.03.010. Mol Cell. 2005. PMID: 15837421 Free article.

5

Multiple robust signatures for detecting lymph node metastasis in head and neck cancer.

Roepman P, Kemmeren P, Wessels LF, Slootweg PJ, Holstege FC. Roepman P, et al. Cancer Res. 2006 Feb 15;66(4):2361-6. doi: 10.1158/0008-5472.CAN-05-3960. Cancer Res. 2006. PMID: 16489042

6

Transcriptome-based identification of pro- and antioxidative gene expression in kidney cortex of nitric oxide-depleted rats.

Wesseling S, Joles JA, van Goor H, Bluyssen HA, Kemmeren P, Holstege FC, Koomans HA, Braam B. Wesseling S, et al. Physiol Genomics. 2007 Jan 17;28(2):158-67. doi: 10.1152/physiolgenomics.00077.2006. Epub 2006 Oct 17. Physiol Genomics. 2007. PMID: 17047089

7

Adaptable gene-specific dye bias correction for two-channel DNA microarrays.

Margaritis T, Lijnzaad P, van Leenen D, Bouwmeester D, Kemmeren P, van Hooff SR, Holstege FC. Margaritis T, et al. Mol Syst Biol. 2009;5:266. doi: 10.1038/msb.2009.21. Epub 2009 Apr 28. Mol Syst Biol. 2009. PMID: 19401678 Free PMC article.

8

The specificity and topology of chromatin interaction pathways in yeast.

Lenstra TL, Benschop JJ, Kim T, Schulze JM, Brabers NA, Margaritis T, van de Pasch LA, van Heesch SA, Brok MO, Groot Koerkamp MJ, Ko CW, van Leenen D, Sameith K, van Hooff SR, Lijnzaad P, Kemmeren P, Hentrich T, Kobor MS, Buratowski S, Holstege FC. Lenstra TL, et al. Mol Cell. 2011 May 20;42(4):536-49. doi: 10.1016/j.molcel.2011.03.026. Mol Cell. 2011. PMID: 21596317 Free PMC article.

9

Tight cooperation between Mot1p and NC2β in regulating genome-wide transcription, repression of transcription following heat shock induction and genetic interaction with SAGA.

Spedale G, Meddens CA, Koster MJ, Ko CW, van Hooff SR, Holstege FC, Timmers HT, Pijnappel WW. Spedale G, et al. Nucleic Acids Res. 2012 Feb;40(3):996-1008. doi: 10.1093/nar/gkr784. Epub 2011 Oct 5. Nucleic Acids Res. 2012. PMID: 21976730 Free PMC article.

10

Validation of a gene expression signature for assessment of lymph node metastasis in oral squamous cell carcinoma.

van Hooff SR, Leusink FK, Roepman P, Baatenburg de Jong RJ, Speel EJ, van den Brekel MW, van Velthuysen ML, van Diest PJ, van Es RJ, Merkx MA, Kummer JA, Leemans CR, Schuuring E, Langendijk JA, Lacko M, De Herdt MJ, Jansen JC, Brakenhoff RH, Slootweg PJ, Takes RP, Holstege FC. van Hooff SR, et al. J Clin Oncol. 2012 Nov 20;30(33):4104-10. doi: 10.1200/JCO.2011.40.4509. Epub 2012 Oct 8. J Clin Oncol. 2012. PMID: 23045589

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