Holmes S - Search Results

1

Bayesian Nonparametric Ordination for the Analysis of Microbial Communities.

Ren B, Bacallado S, Favaro S, Holmes S, Trippa L. Ren B, et al. Among authors: holmes s. J Am Stat Assoc. 2017;112(520):1430-1442. doi: 10.1080/01621459.2017.1288631. Epub 2017 Feb 28. J Am Stat Assoc. 2017. PMID: 29430070 Free PMC article.

2

de Finetti Priors using Markov chain Monte Carlo computations.

Bacallado S, Diaconis P, Holmes S. Bacallado S, et al. Among authors: holmes s. Stat Comput. 2015 Jul 1;25(4):797-808. doi: 10.1007/s11222-015-9562-9. Stat Comput. 2015. PMID: 26412947 Free PMC article.

3

Interactive Visualization of Hierarchically Structured Data.

Sankaran K, Holmes S. Sankaran K, et al. Among authors: holmes s. J Comput Graph Stat. 2018;27(3):553-563. doi: 10.1080/10618600.2017.1392866. Epub 2017 Oct 18. J Comput Graph Stat. 2018. PMID: 30416327 Free PMC article.

4

A Statistical Perspective on the Challenges in Molecular Microbial Biology.

Jeganathan P, Holmes SP. Jeganathan P, et al. J Agric Biol Environ Stat. 2021 Jun;26(2):131-160. doi: 10.1007/s13253-021-00447-1. Epub 2021 Mar 24. J Agric Biol Environ Stat. 2021. PMID: 36398283 Free PMC article.

5

Bayesian Unidimensional Scaling for visualizing uncertainty in high dimensional datasets with latent ordering of observations.

Nguyen LH, Holmes S. Nguyen LH, et al. Among authors: holmes s. BMC Bioinformatics. 2017 Sep 13;18(Suppl 10):394. doi: 10.1186/s12859-017-1790-x. BMC Bioinformatics. 2017. PMID: 28929970 Free PMC article.

6

PhyloChip microarray analysis reveals altered gastrointestinal microbial communities in a rat model of colonic hypersensitivity.

Nelson TA, Holmes S, Alekseyenko AV, Shenoy M, Desantis T, Wu CH, Andersen GL, Winston J, Sonnenburg J, Pasricha PJ, Spormann A. Nelson TA, et al. Among authors: holmes s. Neurogastroenterol Motil. 2011 Feb;23(2):169-77, e41-2. doi: 10.1111/j.1365-2982.2010.01637.x. Epub 2010 Dec 3. Neurogastroenterol Motil. 2011. PMID: 21129126 Free PMC article.

7

An Interactive Java Statistical Image Segmentation System: GemIdent.

Holmes S, Kapelner A, Lee PP. Holmes S, et al. J Stat Softw. 2009 Jun 1;30(10):i10. J Stat Softw. 2009. PMID: 21614138 Free PMC article.

8

REPRODUCIBLE RESEARCH WORKFLOW IN R FOR THE ANALYSIS OF PERSONALIZED HUMAN MICROBIOME DATA.

Callahan B, Proctor D, Relman D, Fukuyama J, Holmes S. Callahan B, et al. Among authors: holmes s. Pac Symp Biocomput. 2016;21:183-94. Pac Symp Biocomput. 2016. PMID: 26776185 Free PMC article.

9

structSSI: Simultaneous and Selective Inference for Grouped or Hierarchically Structured Data.

Sankaran K, Holmes S. Sankaran K, et al. Among authors: holmes s. J Stat Softw. 2014;59(13):1-21. doi: 10.18637/jss.v059.i13. Epub 2014 Sep 12. J Stat Softw. 2014. PMID: 26917999 Free PMC article.

10

Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses.

Callahan BJ, Sankaran K, Fukuyama JA, McMurdie PJ, Holmes SP. Callahan BJ, et al. F1000Res. 2016 Jun 24;5:1492. doi: 10.12688/f1000research.8986.2. eCollection 2016. F1000Res. 2016. PMID: 27508062 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

1,746 results

Search Page