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AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence.
Feldgarden M, Brover V, Gonzalez-Escalona N, Frye JG, Haendiges J, Haft DH, Hoffmann M, Pettengill JB, Prasad AB, Tillman GE, Tyson GH, Klimke W. Feldgarden M, et al. Among authors: hoffmann m. Sci Rep. 2021 Jun 16;11(1):12728. doi: 10.1038/s41598-021-91456-0. Sci Rep. 2021. PMID: 34135355 Free PMC article.
Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals.
Hoffmann M, Zhao S, Pettengill J, Luo Y, Monday SR, Abbott J, Ayers SL, Cinar HN, Muruvanda T, Li C, Allard MW, Whichard J, Meng J, Brown EW, McDermott PF. Hoffmann M, et al. Genome Biol Evol. 2014 May;6(5):1046-68. doi: 10.1093/gbe/evu079. Genome Biol Evol. 2014. PMID: 24732280 Free PMC article.
Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States.
Hoffmann M, Luo Y, Monday SR, Gonzalez-Escalona N, Ottesen AR, Muruvanda T, Wang C, Kastanis G, Keys C, Janies D, Senturk IF, Catalyurek UV, Wang H, Hammack TS, Wolfgang WJ, Schoonmaker-Bopp D, Chu A, Myers R, Haendiges J, Evans PS, Meng J, Strain EA, Allard MW, Brown EW. Hoffmann M, et al. J Infect Dis. 2016 Feb 15;213(4):502-8. doi: 10.1093/infdis/jiv297. Epub 2015 May 20. J Infect Dis. 2016. PMID: 25995194
Comparative Analysis of Extended-Spectrum-β-Lactamase CTX-M-65-Producing Salmonella enterica Serovar Infantis Isolates from Humans, Food Animals, and Retail Chickens in the United States.
Tate H, Folster JP, Hsu CH, Chen J, Hoffmann M, Li C, Morales C, Tyson GH, Mukherjee S, Brown AC, Green A, Wilson W, Dessai U, Abbott J, Joseph L, Haro J, Ayers S, McDermott PF, Zhao S. Tate H, et al. Among authors: hoffmann m. Antimicrob Agents Chemother. 2017 Jun 27;61(7):e00488-17. doi: 10.1128/AAC.00488-17. Print 2017 Jul. Antimicrob Agents Chemother. 2017. PMID: 28483962 Free PMC article.
Genomics of foodborne pathogens for microbial food safety.
Allard MW, Bell R, Ferreira CM, Gonzalez-Escalona N, Hoffmann M, Muruvanda T, Ottesen A, Ramachandran P, Reed E, Sharma S, Stevens E, Timme R, Zheng J, Brown EW. Allard MW, et al. Among authors: hoffmann m. Curr Opin Biotechnol. 2018 Feb;49:224-229. doi: 10.1016/j.copbio.2017.11.002. Epub 2017 Nov 21. Curr Opin Biotechnol. 2018. PMID: 29169072 Review.
3,523 results