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Dissection of a Down syndrome-associated trisomy to separate the gene dosage-dependent and -independent effects of an extra chromosome.
Hum Mol Genet. 2023 Jun 19;32(13):2205-2218. doi: 10.1093/hmg/ddad056.
Hum Mol Genet. 2023.
PMID: 37014740
Free PMC article.
Four-Dimensional Chromosome Structure Prediction.
Highsmith M, Cheng J.
Highsmith M, et al.
Int J Mol Sci. 2021 Sep 10;22(18):9785. doi: 10.3390/ijms22189785.
Int J Mol Sci. 2021.
PMID: 34575948
Free PMC article.
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VEHiCLE: a Variationally Encoded Hi-C Loss Enhancement algorithm for improving and generating Hi-C data.
Highsmith M, Cheng J.
Highsmith M, et al.
Sci Rep. 2021 Apr 23;11(1):8880. doi: 10.1038/s41598-021-88115-9.
Sci Rep. 2021.
PMID: 33893353
Free PMC article.
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Allele-specific aberration of imprinted domain chromosome architecture associates with large offspring syndrome.
Li Y, Boadu F, Highsmith MR, Hagen DE, Cheng J, Rivera RM.
Li Y, et al. Among authors: highsmith mr.
iScience. 2022 Apr 20;25(5):104269. doi: 10.1016/j.isci.2022.104269. eCollection 2022 May 20.
iScience. 2022.
PMID: 35542046
Free PMC article.
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An Overview of Methods for Reconstructing 3-D Chromosome and Genome Structures from Hi-C Data.
Oluwadare O, Highsmith M, Cheng J.
Oluwadare O, et al.
Biol Proced Online. 2019 Apr 24;21:7. doi: 10.1186/s12575-019-0094-0. eCollection 2019.
Biol Proced Online. 2019.
PMID: 31049033
Free PMC article.
Review.
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GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data.
Oluwadare O, Highsmith M, Turner D, Lieberman Aiden E, Cheng J.
Oluwadare O, et al.
BMC Mol Cell Biol. 2020 Aug 5;21(1):60. doi: 10.1186/s12860-020-00304-y.
BMC Mol Cell Biol. 2020.
PMID: 32758136
Free PMC article.
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Correction to: GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data.
Oluwadare O, Highsmith M, Turner D, Lieberman Aiden E, Cheng J.
Oluwadare O, et al.
BMC Mol Cell Biol. 2020 Aug 18;21(1):62. doi: 10.1186/s12860-020-00305-x.
BMC Mol Cell Biol. 2020.
PMID: 32811439
Free PMC article.
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