Herring CA - Search Results

1

Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution.

Herring CA, Simmons RK, Freytag S, Poppe D, Moffet JJD, Pflueger J, Buckberry S, Vargas-Landin DB, Clément O, Echeverría EG, Sutton GJ, Alvarez-Franco A, Hou R, Pflueger C, McDonald K, Polo JM, Forrest ARR, Nowak AK, Voineagu I, Martelotto L, Lister R. Herring CA, et al. Cell. 2022 Nov 10;185(23):4428-4447.e28. doi: 10.1016/j.cell.2022.09.039. Epub 2022 Oct 31. Cell. 2022. PMID: 36318921 Free article.

2

Succinate Produced by Intestinal Microbes Promotes Specification of Tuft Cells to Suppress Ileal Inflammation.

Banerjee A, Herring CA, Chen B, Kim H, Simmons AJ, Southard-Smith AN, Allaman MM, White JR, Macedonia MC, Mckinley ET, Ramirez-Solano MA, Scoville EA, Liu Q, Wilson KT, Coffey RJ, Washington MK, Goettel JA, Lau KS. Banerjee A, et al. Among authors: herring ca. Gastroenterology. 2020 Dec;159(6):2101-2115.e5. doi: 10.1053/j.gastro.2020.08.029. Epub 2020 Aug 21. Gastroenterology. 2020. PMID: 32828819 Free PMC article.

3

Neurog3-Independent Methylation Is the Earliest Detectable Mark Distinguishing Pancreatic Progenitor Identity.

Liu J, Banerjee A, Herring CA, Attalla J, Hu R, Xu Y, Shao Q, Simmons AJ, Dadi PK, Wang S, Jacobson DA, Liu B, Hodges E, Lau KS, Gu G. Liu J, et al. Among authors: herring ca. Dev Cell. 2019 Jan 7;48(1):49-63.e7. doi: 10.1016/j.devcel.2018.11.048. Dev Cell. 2019. PMID: 30620902 Free PMC article.

4

pyNVR: investigating factors affecting feature selection from scRNA-seq data for lineage reconstruction.

Chen B, Herring CA, Lau KS. Chen B, et al. Among authors: herring ca. Bioinformatics. 2019 Jul 1;35(13):2335-2337. doi: 10.1093/bioinformatics/bty950. Bioinformatics. 2019. PMID: 30445607 Free PMC article.

5

Quantitative assessment of cell population diversity in single-cell landscapes.

Liu Q, Herring CA, Sheng Q, Ping J, Simmons AJ, Chen B, Banerjee A, Li W, Gu G, Coffey RJ, Shyr Y, Lau KS. Liu Q, et al. Among authors: herring ca. PLoS Biol. 2018 Oct 22;16(10):e2006687. doi: 10.1371/journal.pbio.2006687. eCollection 2018 Oct. PLoS Biol. 2018. PMID: 30346945 Free PMC article.

6

Single-Cell Computational Strategies for Lineage Reconstruction in Tissue Systems.

Herring CA, Chen B, McKinley ET, Lau KS. Herring CA, et al. Cell Mol Gastroenterol Hepatol. 2018 Feb 13;5(4):539-548. doi: 10.1016/j.jcmgh.2018.01.023. eCollection 2018. Cell Mol Gastroenterol Hepatol. 2018. PMID: 29713661 Free PMC article. Review.

7

Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut.

Herring CA, Banerjee A, McKinley ET, Simmons AJ, Ping J, Roland JT, Franklin JL, Liu Q, Gerdes MJ, Coffey RJ, Lau KS. Herring CA, et al. Cell Syst. 2018 Jan 24;6(1):37-51.e9. doi: 10.1016/j.cels.2017.10.012. Epub 2017 Nov 15. Cell Syst. 2018. PMID: 29153838 Free PMC article.

8

Impaired coordination between signaling pathways is revealed in human colorectal cancer using single-cell mass cytometry of archival tissue blocks.

Simmons AJ, Scurrah CR, McKinley ET, Herring CA, Irish JM, Washington MK, Coffey RJ, Lau KS. Simmons AJ, et al. Among authors: herring ca. Sci Signal. 2016 Oct 11;9(449):rs11. doi: 10.1126/scisignal.aah4413. Sci Signal. 2016. PMID: 27729552 Free PMC article.

9

Cytometry-based single-cell analysis of intact epithelial signaling reveals MAPK activation divergent from TNF-α-induced apoptosis in vivo.

Simmons AJ, Banerjee A, McKinley ET, Scurrah CR, Herring CA, Gewin LS, Masuzaki R, Karp SJ, Franklin JL, Gerdes MJ, Irish JM, Coffey RJ, Lau KS. Simmons AJ, et al. Among authors: herring ca. Mol Syst Biol. 2016 Aug 29;12(8):881. doi: 10.15252/msb.20167270. Mol Syst Biol. 2016. PMID: 27574014 Free PMC article.

10

Cytometry-based single-cell analysis of intact epithelial signaling reveals MAPK activation divergent from TNF-α-induced apoptosis in vivo.

Simmons AJ, Banerjee A, McKinley ET, Scurrah CR, Herring CA, Gewin LS, Masuzaki R, Karp SJ, Franklin JL, Gerdes MJ, Irish JM, Coffey RJ, Lau KS. Simmons AJ, et al. Among authors: herring ca. Mol Syst Biol. 2015 Oct 30;11(10):835. doi: 10.15252/msb.20156282. Mol Syst Biol. 2015. PMID: 26519361 Free PMC article.

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