Heermann D - Search Results

1

Self-organised segregation of bacterial chromosomal origins.

Hofmann A, Mäkelä J, Sherratt DJ, Heermann D, Murray SM. Hofmann A, et al. Among authors: heermann d. Elife. 2019 Aug 9;8:e46564. doi: 10.7554/eLife.46564. Elife. 2019. PMID: 31397672 Free PMC article.

2

Zinc finger proteins and the 3D organization of chromosomes.

Feinauer CJ, Hofmann A, Goldt S, Liu L, Máté G, Heermann DW. Feinauer CJ, et al. Adv Protein Chem Struct Biol. 2013;90:67-117. doi: 10.1016/B978-0-12-410523-2.00003-1. Adv Protein Chem Struct Biol. 2013. PMID: 23582202

3

A topological similarity measure for proteins.

Máté G, Hofmann A, Wenzel N, Heermann DW. Máté G, et al. Biochim Biophys Acta. 2014 Apr;1838(4):1180-90. doi: 10.1016/j.bbamem.2013.08.019. Epub 2013 Sep 10. Biochim Biophys Acta. 2014. PMID: 24036226 Free article.

4

The role of loops on the order of eukaryotes and prokaryotes.

Hofmann A, Heermann DW. Hofmann A, et al. FEBS Lett. 2015 Oct 7;589(20 Pt A):2958-65. doi: 10.1016/j.febslet.2015.04.021. Epub 2015 Apr 23. FEBS Lett. 2015. PMID: 25912650 Free article. Review.

5

Using Persistent Homology as a New Approach for Super-Resolution Localization Microscopy Data Analysis and Classification of γH2AX Foci/Clusters.

Hofmann A, Krufczik M, Heermann DW, Hausmann M. Hofmann A, et al. Int J Mol Sci. 2018 Aug 2;19(8):2263. doi: 10.3390/ijms19082263. Int J Mol Sci. 2018. PMID: 30072594 Free PMC article.

6

Processing and Analysis of Hi-C Data on Bacteria.

Hofmann A, Heermann DW. Hofmann A, et al. Methods Mol Biol. 2018;1837:19-31. doi: 10.1007/978-1-4939-8675-0_2. Methods Mol Biol. 2018. PMID: 30109603 Review.

7

Deciphering 3D Organization of Chromosomes Using Hi-C Data.

Hofmann A, Heermann DW. Hofmann A, et al. Methods Mol Biol. 2018;1837:389-401. doi: 10.1007/978-1-4939-8675-0_19. Methods Mol Biol. 2018. PMID: 30109620

8

Elucidation of the Clustered Nano-Architecture of Radiation-Induced DNA Damage Sites and Surrounding Chromatin in Cancer Cells: A Single Molecule Localization Microscopy Approach.

Hausmann M, Falk M, Neitzel C, Hofmann A, Biswas A, Gier T, Falkova I, Heermann DW, Hildenbrand G. Hausmann M, et al. Among authors: heermann dw. Int J Mol Sci. 2021 Mar 31;22(7):3636. doi: 10.3390/ijms22073636. Int J Mol Sci. 2021. PMID: 33807337 Free PMC article.

9

Telomerase subunit Est2 marks internal sites that are prone to accumulate DNA damage.

Pandey S, Hajikazemi M, Zacheja T, Schalbetter S, Neale MJ, Baxter J, Guryev V, Hofmann A, Heermann DW, Juranek SA, Paeschke K. Pandey S, et al. Among authors: heermann dw. BMC Biol. 2021 Nov 20;19(1):247. doi: 10.1186/s12915-021-01167-1. BMC Biol. 2021. PMID: 34801008 Free PMC article.

10

A chromosomal loop anchor mediates bacterial genome organization.

Dugar G, Hofmann A, Heermann DW, Hamoen LW. Dugar G, et al. Among authors: heermann dw. Nat Genet. 2022 Feb;54(2):194-201. doi: 10.1038/s41588-021-00988-8. Epub 2022 Jan 24. Nat Genet. 2022. PMID: 35075232

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