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The NCI Genomic Data Commons.
Heath AP, Ferretti V, Agrawal S, An M, Angelakos JC, Arya R, Bajari R, Baqar B, Barnowski JHB, Burt J, Catton A, Chan BF, Chu F, Cullion K, Davidsen T, Do PM, Dompierre C, Ferguson ML, Fitzsimons MS, Ford M, Fukuma M, Gaheen S, Ganji GL, Garcia TI, George SS, Gerhard DS, Gerthoffert F, Gomez F, Han K, Hernandez KM, Issac B, Jackson R, Jensen MA, Joshi S, Kadam A, Khurana A, Kim KMJ, Kraft VE, Li S, Lichtenberg TM, Lodato J, Lolla L, Martinov P, Mazzone JA, Miller DP, Miller I, Miller JS, Miyauchi K, Murphy MW, Nullet T, Ogwara RO, Ortuño FM, Pedrosa J, Pham PL, Popov MY, Porter JJ, Powell R, Rademacher K, Reid CP, Rich S, Rogel B, Sahni H, Savage JH, Schmitt KA, Simmons TJ, Sislow J, Spring J, Stein L, Sullivan S, Tang Y, Thiagarajan M, Troyer HD, Wang C, Wang Z, West BL, Wilmer A, Wilson S, Wu K, Wysocki WP, Xiang L, Yamada JT, Yang L, Yu C, Yung CK, Zenklusen JC, Zhang J, Zhang Z, Zhao Y, Zubair A, Staudt LM, Grossman RL. Heath AP, et al. Nat Genet. 2021 Mar;53(3):257-262. doi: 10.1038/s41588-021-00791-5. Nat Genet. 2021. PMID: 33619384 No abstract available.
Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets.
Heath AP, Greenway M, Powell R, Spring J, Suarez R, Hanley D, Bandlamudi C, McNerney ME, White KP, Grossman RL. Heath AP, et al. J Am Med Inform Assoc. 2014 Nov-Dec;21(6):969-75. doi: 10.1136/amiajnl-2013-002155. Epub 2014 Jan 24. J Am Med Inform Assoc. 2014. PMID: 24464852 Free PMC article.
Toward a Shared Vision for Cancer Genomic Data.
Grossman RL, Heath AP, Ferretti V, Varmus HE, Lowy DR, Kibbe WA, Staudt LM. Grossman RL, et al. Among authors: heath ap. N Engl J Med. 2016 Sep 22;375(12):1109-12. doi: 10.1056/NEJMp1607591. N Engl J Med. 2016. PMID: 27653561 Free PMC article. No abstract available.
Data Commons to Support Pediatric Cancer Research.
Volchenboum SL, Cox SM, Heath A, Resnick A, Cohn SL, Grossman R. Volchenboum SL, et al. Am Soc Clin Oncol Educ Book. 2017;37:746-752. doi: 10.1200/EDBK_175029. Am Soc Clin Oncol Educ Book. 2017. PMID: 28561664 Free article. Review.
A Case for Data Commons: Toward Data Science as a Service.
Grossman RL, Heath A, Murphy M, Patterson M, Wells W. Grossman RL, et al. Comput Sci Eng. 2016 Sep-Oct;18(5):10-20. doi: 10.1109/MCSE.2016.92. Epub 2016 Aug 24. Comput Sci Eng. 2016. PMID: 29033693 Free PMC article.
Genomic footprints of activated telomere maintenance mechanisms in cancer.
Sieverling L, Hong C, Koser SD, Ginsbach P, Kleinheinz K, Hutter B, Braun DM, Cortés-Ciriano I, Xi R, Kabbe R, Park PJ, Eils R, Schlesner M; PCAWG-Structural Variation Working Group; Brors B, Rippe K, Jones DTW, Feuerbach L; PCAWG Consortium. Sieverling L, et al. Nat Commun. 2020 Feb 5;11(1):733. doi: 10.1038/s41467-019-13824-9. Nat Commun. 2020. PMID: 32024817 Free PMC article.
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations.
Zhang Y, Chen F, Fonseca NA, He Y, Fujita M, Nakagawa H, Zhang Z, Brazma A; PCAWG Transcriptome Working Group; PCAWG Structural Variation Working Group; Creighton CJ; PCAWG Consortium. Zhang Y, et al. Nat Commun. 2020 Feb 5;11(1):736. doi: 10.1038/s41467-019-13885-w. Nat Commun. 2020. PMID: 32024823 Free PMC article.
77 results