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SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2).
Bentley SD, Brown S, Murphy LD, Harris DE, Quail MA, Parkhill J, Barrell BG, McCormick JR, Santamaria RI, Losick R, Yamasaki M, Kinashi H, Chen CW, Chandra G, Jakimowicz D, Kieser HM, Kieser T, Chater KF. Bentley SD, et al. Among authors: harris de. Mol Microbiol. 2004 Mar;51(6):1615-28. doi: 10.1111/j.1365-2958.2003.03949.x. Mol Microbiol. 2004. PMID: 15009889 Free article.
Sequencing bacterial artificial chromosomes.
Harris DE, Murphy L. Harris DE, et al. Methods Mol Biol. 2001;175:217-34. doi: 10.1385/1-59259-235-X:217. Methods Mol Biol. 2001. PMID: 11462837 Review. No abstract available.
Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens.
Wilkinson P, Waterfield NR, Crossman L, Corton C, Sanchez-Contreras M, Vlisidou I, Barron A, Bignell A, Clark L, Ormond D, Mayho M, Bason N, Smith F, Simmonds M, Churcher C, Harris D, Thompson NR, Quail M, Parkhill J, Ffrench-Constant RH. Wilkinson P, et al. Among authors: harris d. BMC Genomics. 2009 Jul 7;10:302. doi: 10.1186/1471-2164-10-302. BMC Genomics. 2009. PMID: 19583835 Free PMC article.
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ. Parkhill J, et al. Among authors: harris b, harris de. Nat Genet. 2003 Sep;35(1):32-40. doi: 10.1038/ng1227. Epub 2003 Aug 10. Nat Genet. 2003. PMID: 12910271
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes.
Bentley SD, Aanensen DM, Mavroidi A, Saunders D, Rabbinowitsch E, Collins M, Donohoe K, Harris D, Murphy L, Quail MA, Samuel G, Skovsted IC, Kaltoft MS, Barrell B, Reeves PR, Parkhill J, Spratt BG. Bentley SD, et al. Among authors: harris d. PLoS Genet. 2006 Mar;2(3):e31. doi: 10.1371/journal.pgen.0020031. Epub 2006 Mar 10. PLoS Genet. 2006. PMID: 16532061 Free PMC article.
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei.
Bentley SD, Maiwald M, Murphy LD, Pallen MJ, Yeats CA, Dover LG, Norbertczak HT, Besra GS, Quail MA, Harris DE, von Herbay A, Goble A, Rutter S, Squares R, Squares S, Barrell BG, Parkhill J, Relman DA. Bentley SD, et al. Among authors: harris de. Lancet. 2003 Feb 22;361(9358):637-44. doi: 10.1016/S0140-6736(03)12597-4. Lancet. 2003. PMID: 12606174
Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction.
Sebaihia M, Preston A, Maskell DJ, Kuzmiak H, Connell TD, King ND, Orndorff PE, Miyamoto DM, Thomson NR, Harris D, Goble A, Lord A, Murphy L, Quail MA, Rutter S, Squares R, Squares S, Woodward J, Parkhill J, Temple LM. Sebaihia M, et al. Among authors: harris d. J Bacteriol. 2006 Aug;188(16):6002-15. doi: 10.1128/JB.01927-05. J Bacteriol. 2006. PMID: 16885469 Free PMC article.
Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69.
Iguchi A, Thomson NR, Ogura Y, Saunders D, Ooka T, Henderson IR, Harris D, Asadulghani M, Kurokawa K, Dean P, Kenny B, Quail MA, Thurston S, Dougan G, Hayashi T, Parkhill J, Frankel G. Iguchi A, et al. Among authors: harris d. J Bacteriol. 2009 Jan;191(1):347-54. doi: 10.1128/JB.01238-08. Epub 2008 Oct 24. J Bacteriol. 2009. PMID: 18952797 Free PMC article.
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa.
Winstanley C, Langille MG, Fothergill JL, Kukavica-Ibrulj I, Paradis-Bleau C, Sanschagrin F, Thomson NR, Winsor GL, Quail MA, Lennard N, Bignell A, Clarke L, Seeger K, Saunders D, Harris D, Parkhill J, Hancock RE, Brinkman FS, Levesque RC. Winstanley C, et al. Among authors: harris d. Genome Res. 2009 Jan;19(1):12-23. doi: 10.1101/gr.086082.108. Epub 2008 Dec 1. Genome Res. 2009. PMID: 19047519 Free PMC article.
4,311 results