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Phylodynamics of Enterovirus A71-Associated Hand, Foot, and Mouth Disease in Viet Nam.
Geoghegan JL, Tan le V, Kühnert D, Halpin RA, Lin X, Simenauer A, Akopov A, Das SR, Stockwell TB, Shrivastava S, Ngoc NM, Uyen le TT, Tuyen NT, Thanh TT, Hang VT, Qui PT, Hung NT, Khanh TH, Thinh le Q, Nhan le NT, Van HM, Viet do C, Tuan HM, Viet HL, Hien TT, Chau NV, Thwaites G, Grenfell BT, Stadler T, Wentworth DE, Holmes EC, Van Doorn HR. Geoghegan JL, et al. Among authors: halpin ra. J Virol. 2015 Sep;89(17):8871-9. doi: 10.1128/JVI.00706-15. Epub 2015 Jun 17. J Virol. 2015. PMID: 26085170 Free PMC article.
Mixed infection and the genesis of influenza virus diversity.
Ghedin E, Fitch A, Boyne A, Griesemer S, DePasse J, Bera J, Zhang X, Halpin RA, Smit M, Jennings L, St George K, Holmes EC, Spiro DJ. Ghedin E, et al. Among authors: halpin ra. J Virol. 2009 Sep;83(17):8832-41. doi: 10.1128/JVI.00773-09. Epub 2009 Jun 24. J Virol. 2009. PMID: 19553313 Free PMC article.
The early diversification of influenza A/H1N1pdm.
Nelson M, Spiro D, Wentworth D, Beck E, Fan J, Ghedin E, Halpin R, Bera J, Hine E, Proudfoot K, Stockwell T, Lin X, Griesemer S, Kumar S, Bose M, Viboud C, Holmes E, Henrickson K. Nelson M, et al. PLoS Curr. 2009 Nov 3;1:RRN1126. doi: 10.1371/currents.rrn1126. PLoS Curr. 2009. PMID: 20029664 Free PMC article.
Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic.
Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, DePasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC. Ghedin E, et al. Among authors: halpin ra. J Virol. 2010 Jun;84(11):5715-8. doi: 10.1128/JVI.00018-10. Epub 2010 Mar 17. J Virol. 2010. PMID: 20237080 Free PMC article.
Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance.
Ghedin E, Laplante J, DePasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K. Ghedin E, et al. Among authors: halpin ra. J Infect Dis. 2011 Jan 15;203(2):168-74. doi: 10.1093/infdis/jiq040. J Infect Dis. 2011. PMID: 21288815 Free PMC article.
Extensive geographical mixing of 2009 human H1N1 influenza A virus in a single university community.
Holmes EC, Ghedin E, Halpin RA, Stockwell TB, Zhang XQ, Fleming R, Davey R, Benson CA, Mehta S, Taplitz R, Liu YT, Brouwer KC, Wentworth DE, Lin X, Schooley RT; INSIGHT FLU002 Study Group. Holmes EC, et al. Among authors: halpin ra. J Virol. 2011 Jul;85(14):6923-9. doi: 10.1128/JVI.00438-11. Epub 2011 May 18. J Virol. 2011. PMID: 21593168 Free PMC article.
Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans.
Bahl J, Nelson MI, Chan KH, Chen R, Vijaykrishna D, Halpin RA, Stockwell TB, Lin X, Wentworth DE, Ghedin E, Guan Y, Peiris JS, Riley S, Rambaut A, Holmes EC, Smith GJ. Bahl J, et al. Among authors: halpin ra. Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19359-64. doi: 10.1073/pnas.1109314108. Epub 2011 Nov 14. Proc Natl Acad Sci U S A. 2011. PMID: 22084096 Free PMC article.
123 results