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Deep learning-based classification of kidney transplant pathology: a retrospective, multicentre, proof-of-concept study.
Kers J, Bülow RD, Klinkhammer BM, Breimer GE, Fontana F, Abiola AA, Hofstraat R, Corthals GL, Peters-Sengers H, Djudjaj S, von Stillfried S, Hölscher DL, Pieters TT, van Zuilen AD, Bemelman FJ, Nurmohamed AS, Naesens M, Roelofs JJTH, Florquin S, Floege J, Nguyen TQ, Kather JN, Boor P. Kers J, et al. Among authors: holscher dl. Lancet Digit Health. 2022 Jan;4(1):e18-e26. doi: 10.1016/S2589-7500(21)00211-9. Epub 2021 Nov 15. Lancet Digit Health. 2022. PMID: 34794930 Free article.
Tackling stain variability using CycleGAN-based stain augmentation.
Bouteldja N, Hölscher DL, Bülow RD, Roberts ISD, Coppo R, Boor P. Bouteldja N, et al. Among authors: holscher dl. J Pathol Inform. 2022 Sep 13;13:100140. doi: 10.1016/j.jpi.2022.100140. eCollection 2022. J Pathol Inform. 2022. PMID: 36268102 Free PMC article.
Next-Generation Morphometry for pathomics-data mining in histopathology.
Hölscher DL, Bouteldja N, Joodaki M, Russo ML, Lan YC, Sadr AV, Cheng M, Tesar V, Stillfried SV, Klinkhammer BM, Barratt J, Floege J, Roberts ISD, Coppo R, Costa IG, Bülow RD, Boor P. Hölscher DL, et al. Nat Commun. 2023 Jan 28;14(1):470. doi: 10.1038/s41467-023-36173-0. Nat Commun. 2023. PMID: 36709324 Free PMC article.
Extending the landscape of omics technologies by pathomics.
Bülow RD, Hölscher DL, Costa IG, Boor P. Bülow RD, et al. Among authors: holscher dl. NPJ Syst Biol Appl. 2023 Aug 7;9(1):38. doi: 10.1038/s41540-023-00301-9. NPJ Syst Biol Appl. 2023. PMID: 37550386 Free PMC article. No abstract available.
Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT).
Joodaki M, Shaigan M, Parra V, Bülow RD, Kuppe C, Hölscher DL, Cheng M, Nagai JS, Goedertier M, Bouteldja N, Tesar V, Barratt J, Roberts IS, Coppo R, Kramann R, Boor P, Costa IG. Joodaki M, et al. Among authors: holscher dl. Mol Syst Biol. 2024 Feb;20(2):57-74. doi: 10.1038/s44320-023-00003-8. Epub 2023 Dec 19. Mol Syst Biol. 2024. PMID: 38177382 Free PMC article.