Guo Y - Search Results

1

Major β cell-specific functions of NKX2.2 are mediated via the NK2-specific domain.

Abarinov V, Levine JA, Churchill AJ, Hopwood B, Deiter CS, Guney MA, Wells KL, Schrunk JM, Guo Y, Hammelman J, Gifford DK, Magnuson MA, Wichterle H, Sussel L. Abarinov V, et al. Among authors: guo y. Genes Dev. 2023 Jun 1;37(11-12):490-504. doi: 10.1101/gad.350569.123. Epub 2023 Jun 26. Genes Dev. 2023. PMID: 37364986 Free PMC article.

2

Discovering homotypic binding events at high spatial resolution.

Guo Y, Papachristoudis G, Altshuler RC, Gerber GK, Jaakkola TS, Gifford DK, Mahony S. Guo Y, et al. Bioinformatics. 2010 Dec 15;26(24):3028-34. doi: 10.1093/bioinformatics/btq590. Epub 2010 Oct 21. Bioinformatics. 2010. PMID: 20966006 Free PMC article.

3

High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints.

Guo Y, Mahony S, Gifford DK. Guo Y, et al. PLoS Comput Biol. 2012;8(8):e1002638. doi: 10.1371/journal.pcbi.1002638. Epub 2012 Aug 9. PLoS Comput Biol. 2012. PMID: 22912568 Free PMC article.

4

High-throughput mapping of regulatory DNA.

Rajagopal N, Srinivasan S, Kooshesh K, Guo Y, Edwards MD, Banerjee B, Syed T, Emons BJ, Gifford DK, Sherwood RI. Rajagopal N, et al. Among authors: guo y. Nat Biotechnol. 2016 Feb;34(2):167-74. doi: 10.1038/nbt.3468. Epub 2016 Jan 25. Nat Biotechnol. 2016. PMID: 26807528 Free PMC article.

5

Identification of new branch points and unconventional introns in Saccharomyces cerevisiae.

Gould GM, Paggi JM, Guo Y, Phizicky DV, Zinshteyn B, Wang ET, Gilbert WV, Gifford DK, Burge CB. Gould GM, et al. Among authors: guo y. RNA. 2016 Oct;22(10):1522-34. doi: 10.1261/rna.057216.116. Epub 2016 Jul 29. RNA. 2016. PMID: 27473169 Free PMC article.

6

Expression of Terminal Effector Genes in Mammalian Neurons Is Maintained by a Dynamic Relay of Transient Enhancers.

Rhee HS, Closser M, Guo Y, Bashkirova EV, Tan GC, Gifford DK, Wichterle H. Rhee HS, et al. Among authors: guo y. Neuron. 2016 Dec 21;92(6):1252-1265. doi: 10.1016/j.neuron.2016.11.037. Epub 2016 Dec 8. Neuron. 2016. PMID: 27939581 Free PMC article.

7

Modular combinatorial binding among human trans-acting factors reveals direct and indirect factor binding.

Guo Y, Gifford DK. Guo Y, et al. BMC Genomics. 2017 Jan 6;18(1):45. doi: 10.1186/s12864-016-3434-3. BMC Genomics. 2017. PMID: 28061806 Free PMC article.

8

Accurate eQTL prioritization with an ensemble-based framework.

Zeng H, Edwards MD, Guo Y, Gifford DK. Zeng H, et al. Among authors: guo y. Hum Mutat. 2017 Sep;38(9):1259-1265. doi: 10.1002/humu.23198. Epub 2017 Apr 19. Hum Mutat. 2017. PMID: 28224684 Free PMC article.

9

A novel k-mer set memory (KSM) motif representation improves regulatory variant prediction.

Guo Y, Tian K, Zeng H, Guo X, Gifford DK. Guo Y, et al. Among authors: guo x. Genome Res. 2018 Jun;28(6):891-900. doi: 10.1101/gr.226852.117. Epub 2018 Apr 13. Genome Res. 2018. PMID: 29654070 Free PMC article.

10

High resolution discovery of chromatin interactions.

Guo Y, Krismer K, Closser M, Wichterle H, Gifford DK. Guo Y, et al. Nucleic Acids Res. 2019 Apr 8;47(6):e35. doi: 10.1093/nar/gkz051. Nucleic Acids Res. 2019. PMID: 30953075 Free PMC article.

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