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Selection and identification of an RNA aptamer that specifically binds the HIV-1 capsid lattice and inhibits viral replication.
Nucleic Acids Res. 2022 Feb 22;50(3):1701-1717. doi: 10.1093/nar/gkab1293.
Nucleic Acids Res. 2022.
PMID: 35018437
Free PMC article.
2'-fluoro-modified pyrimidines enhance affinity of RNA oligonucleotides to HIV-1 reverse transcriptase.
Gruenke PR, Alam KK, Singh K, Burke DH.
Gruenke PR, et al.
RNA. 2020 Nov;26(11):1667-1679. doi: 10.1261/rna.077008.120. Epub 2020 Jul 30.
RNA. 2020.
PMID: 32732393
Free PMC article.
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FASTAptameR 2.0: A web tool for combinatorial sequence selections.
Kramer ST, Gruenke PR, Alam KK, Xu D, Burke DH.
Kramer ST, et al. Among authors: gruenke pr.
Mol Ther Nucleic Acids. 2022 Aug 24;29:862-870. doi: 10.1016/j.omtn.2022.08.030. eCollection 2022 Sep 13.
Mol Ther Nucleic Acids. 2022.
PMID: 36159593
Free PMC article.
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Minimizing amplification bias during reverse transcription for in vitro selections.
Lucas JK, Gruenke PR, Burke DH.
Lucas JK, et al. Among authors: gruenke pr.
RNA. 2023 Aug;29(8):1301-1315. doi: 10.1261/rna.079650.123. Epub 2023 May 16.
RNA. 2023.
PMID: 37192815
Free PMC article.
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Effect of Aptamer Binding on the Electron-Transfer Properties of Redox Cofactors.
Emahi I, Gruenke PR, Baum DA.
Emahi I, et al. Among authors: gruenke pr.
J Mol Evol. 2015 Dec;81(5-6):186-93. doi: 10.1007/s00239-015-9707-7. Epub 2015 Oct 24.
J Mol Evol. 2015.
PMID: 26498628
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Differentiation SELEX approach identifies RNA aptamers with different specificities for HIV-1 capsid assembly forms.
Gruenke PR, Mayer MD, Aneja R, Song Z, Burke DH, Heng X, Lange MJ.
Gruenke PR, et al.
bioRxiv [Preprint]. 2023 Dec 12:2023.12.11.571135. doi: 10.1101/2023.12.11.571135.
bioRxiv. 2023.
PMID: 38168417
Free PMC article.
Preprint.
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