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Discovering homotypic binding events at high spatial resolution.
Guo Y, Papachristoudis G, Altshuler RC, Gerber GK, Jaakkola TS, Gifford DK, Mahony S. Guo Y, et al. Among authors: gifford dk. Bioinformatics. 2010 Dec 15;26(24):3028-34. doi: 10.1093/bioinformatics/btq590. Epub 2010 Oct 21. Bioinformatics. 2010. PMID: 20966006 Free PMC article.
High resolution mapping of enhancer-promoter interactions.
Reeder C, Closser M, Poh HM, Sandhu K, Wichterle H, Gifford D. Reeder C, et al. PLoS One. 2015 May 13;10(5):e0122420. doi: 10.1371/journal.pone.0122420. eCollection 2015. PLoS One. 2015. PMID: 25970635 Free PMC article.
High resolution discovery of chromatin interactions.
Guo Y, Krismer K, Closser M, Wichterle H, Gifford DK. Guo Y, et al. Among authors: gifford dk. Nucleic Acids Res. 2019 Apr 8;47(6):e35. doi: 10.1093/nar/gkz051. Nucleic Acids Res. 2019. PMID: 30953075 Free PMC article.
IDR2D identifies reproducible genomic interactions.
Krismer K, Guo Y, Gifford DK. Krismer K, et al. Among authors: gifford dk. Nucleic Acids Res. 2020 Apr 6;48(6):e31. doi: 10.1093/nar/gkaa030. Nucleic Acids Res. 2020. PMID: 32009147 Free PMC article.
124 results