Giannone RJ - Search Results

1

Effects of microbiota-directed foods in gnotobiotic animals and undernourished children.

Gehrig JL, Venkatesh S, Chang HW, Hibberd MC, Kung VL, Cheng J, Chen RY, Subramanian S, Cowardin CA, Meier MF, O'Donnell D, Talcott M, Spears LD, Semenkovich CF, Henrissat B, Giannone RJ, Hettich RL, Ilkayeva O, Muehlbauer M, Newgard CB, Sawyer C, Head RD, Rodionov DA, Arzamasov AA, Leyn SA, Osterman AL, Hossain MI, Islam M, Choudhury N, Sarker SA, Huq S, Mahmud I, Mostafa I, Mahfuz M, Barratt MJ, Ahmed T, Gordon JI. Gehrig JL, et al. Among authors: giannone rj. Science. 2019 Jul 12;365(6449):eaau4732. doi: 10.1126/science.aau4732. Science. 2019. PMID: 31296738 Free PMC article. Clinical Trial.

2

Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725.

Dam P, Kataeva I, Yang SJ, Zhou F, Yin Y, Chou W, Poole FL 2nd, Westpheling J, Hettich R, Giannone R, Lewis DL, Kelly R, Gilbert HJ, Henrissat B, Xu Y, Adams MW. Dam P, et al. Nucleic Acids Res. 2011 Apr;39(8):3240-54. doi: 10.1093/nar/gkq1281. Epub 2011 Jan 11. Nucleic Acids Res. 2011. PMID: 21227922 Free PMC article.

3

Use of label-free quantitative proteomics to distinguish the secreted cellulolytic systems of Caldicellulosiruptor bescii and Caldicellulosiruptor obsidiansis.

Lochner A, Giannone RJ, Rodriguez M Jr, Shah MB, Mielenz JR, Keller M, Antranikian G, Graham DE, Hettich RL. Lochner A, et al. Among authors: giannone rj. Appl Environ Microbiol. 2011 Jun;77(12):4042-54. doi: 10.1128/AEM.02811-10. Epub 2011 Apr 15. Appl Environ Microbiol. 2011. PMID: 21498747 Free PMC article.

4

Label-free quantitative proteomics for the extremely thermophilic bacterium Caldicellulosiruptor obsidiansis reveal distinct abundance patterns upon growth on cellobiose, crystalline cellulose, and switchgrass.

Lochner A, Giannone RJ, Keller M, Antranikian G, Graham DE, Hettich RL. Lochner A, et al. Among authors: giannone rj. J Proteome Res. 2011 Dec 2;10(12):5302-14. doi: 10.1021/pr200536j. Epub 2011 Nov 8. J Proteome Res. 2011. PMID: 21988591

5

Defining the boundaries and characterizing the landscape of functional genome expression in vascular tissues of Populus using shotgun proteomics.

Abraham P, Adams R, Giannone RJ, Kalluri U, Ranjan P, Erickson B, Shah M, Tuskan GA, Hettich RL. Abraham P, et al. Among authors: giannone rj. J Proteome Res. 2012 Jan 1;11(1):449-60. doi: 10.1021/pr200851y. Epub 2011 Nov 9. J Proteome Res. 2012. PMID: 22003893

6

Microbial metaproteomics: identifying the repertoire of proteins that microorganisms use to compete and cooperate in complex environmental communities.

Hettich RL, Sharma R, Chourey K, Giannone RJ. Hettich RL, et al. Among authors: giannone rj. Curr Opin Microbiol. 2012 Jun;15(3):373-80. doi: 10.1016/j.mib.2012.04.008. Epub 2012 May 24. Curr Opin Microbiol. 2012. PMID: 22632760 Review.

7

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress.

Yang S, Giannone RJ, Dice L, Yang ZK, Engle NL, Tschaplinski TJ, Hettich RL, Brown SD. Yang S, et al. Among authors: giannone rj. BMC Genomics. 2012 Jul 23;13:336. doi: 10.1186/1471-2164-13-336. BMC Genomics. 2012. PMID: 22823947 Free PMC article.

8

Putting the pieces together: high-performance LC-MS/MS provides network-, pathway-, and protein-level perspectives in Populus.

Abraham P, Giannone RJ, Adams RM, Kalluri U, Tuskan GA, Hettich RL. Abraham P, et al. Among authors: giannone rj. Mol Cell Proteomics. 2013 Jan;12(1):106-19. doi: 10.1074/mcp.M112.022996. Epub 2012 Oct 16. Mol Cell Proteomics. 2013. PMID: 23073815 Free PMC article.

9

Metaproteomics: harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities.

Hettich RL, Pan C, Chourey K, Giannone RJ. Hettich RL, et al. Among authors: giannone rj. Anal Chem. 2013 May 7;85(9):4203-14. doi: 10.1021/ac303053e. Epub 2013 Mar 21. Anal Chem. 2013. PMID: 23469896 Free PMC article. Review.

10

Metaproteomics: extracting and mining proteome information to characterize metabolic activities in microbial communities.

Abraham PE, Giannone RJ, Xiong W, Hettich RL. Abraham PE, et al. Among authors: giannone rj. Curr Protoc Bioinformatics. 2014 Jun 17;46:13.26.1-13.26.14. doi: 10.1002/0471250953.bi1326s46. Curr Protoc Bioinformatics. 2014. PMID: 24939130

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