Gerstein M - Search Results

1

DiNeR: a Differential graphical model for analysis of co-regulation Network Rewiring.

Zhang J, Liu J, Lee D, Lou S, Chen Z, Gürsoy G, Gerstein M. Zhang J, et al. Among authors: gerstein m. BMC Bioinformatics. 2020 Jul 2;21(1):281. doi: 10.1186/s12859-020-03605-3. BMC Bioinformatics. 2020. PMID: 32615918 Free PMC article.

2

Genomic analysis of gene expression relationships in transcriptional regulatory networks.

Yu H, Luscombe NM, Qian J, Gerstein M. Yu H, et al. Among authors: gerstein m. Trends Genet. 2003 Aug;19(8):422-7. doi: 10.1016/S0168-9525(03)00175-6. Trends Genet. 2003. PMID: 12902159

3

Genomic analysis of essentiality within protein networks.

Yu H, Greenbaum D, Xin Lu H, Zhu X, Gerstein M. Yu H, et al. Among authors: gerstein m. Trends Genet. 2004 Jun;20(6):227-31. doi: 10.1016/j.tig.2004.04.008. Trends Genet. 2004. PMID: 15145574 Review.

4

Genomic analysis of regulatory network dynamics reveals large topological changes.

Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, Gerstein M. Luscombe NM, et al. Among authors: gerstein m. Nature. 2004 Sep 16;431(7006):308-12. doi: 10.1038/nature02782. Nature. 2004. PMID: 15372033 Free article.

5

Genomic analysis of the hierarchical structure of regulatory networks.

Yu H, Gerstein M. Yu H, et al. Among authors: gerstein m. Proc Natl Acad Sci U S A. 2006 Oct 3;103(40):14724-31. doi: 10.1073/pnas.0508637103. Epub 2006 Sep 26. Proc Natl Acad Sci U S A. 2006. PMID: 17003135 Free PMC article.

6

An efficient pseudomedian filter for tiling microrrays.

Royce TE, Carriero NJ, Gerstein MB. Royce TE, et al. BMC Bioinformatics. 2007 Jun 7;8:186. doi: 10.1186/1471-2105-8-186. BMC Bioinformatics. 2007. PMID: 17555595 Free PMC article.

7

PARE: a tool for comparing protein abundance and mRNA expression data.

Yu EZ, Burba AE, Gerstein M. Yu EZ, et al. Among authors: gerstein m. BMC Bioinformatics. 2007 Aug 24;8:309. doi: 10.1186/1471-2105-8-309. BMC Bioinformatics. 2007. PMID: 17718915 Free PMC article.

8

Training set expansion: an approach to improving the reconstruction of biological networks from limited and uneven reliable interactions.

Yip KY, Gerstein M. Yip KY, et al. Among authors: gerstein m. Bioinformatics. 2009 Jan 15;25(2):243-50. doi: 10.1093/bioinformatics/btn602. Epub 2008 Nov 17. Bioinformatics. 2009. PMID: 19015141 Free PMC article.

9

Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.

Lefrançois P, Euskirchen GM, Auerbach RK, Rozowsky J, Gibson T, Yellman CM, Gerstein M, Snyder M. Lefrançois P, et al. Among authors: gerstein m. BMC Genomics. 2009 Jan 21;10:37. doi: 10.1186/1471-2164-10-37. BMC Genomics. 2009. PMID: 19159457 Free PMC article.

10

Systematic identification of transcription factors associated with patient survival in cancers.

Cheng C, Li LM, Alves P, Gerstein M. Cheng C, et al. Among authors: gerstein m. BMC Genomics. 2009 May 15;10:225. doi: 10.1186/1471-2164-10-225. BMC Genomics. 2009. PMID: 19442316 Free PMC article.

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