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1998 2
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Showing results for genes xe m
Search for Genesc Xe M instead (1 results)
Deciphering drug resistance in Mycobacterium tuberculosis using whole-genome sequencing: progress, promise, and challenges.
Cohen KA, Manson AL, Desjardins CA, Abeel T, Earl AM. Cohen KA, et al. Genome Med. 2019 Jul 25;11(1):45. doi: 10.1186/s13073-019-0660-8. Genome Med. 2019. PMID: 31345251 Free PMC article. Review.
Whole-genome sequencing (WGS) studies of Mycobacterium tuberculosis, the causative agent of TB, have greatly increased our understanding of this pathogen. Since the first M. tuberculosis genome was published in 1998, WGS has provided a more complete account of the genomic …
Whole-genome sequencing (WGS) studies of Mycobacterium tuberculosis, the causative agent of TB, have greatly increased our understanding of …
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain.
Joglekar A, Prjibelski A, Mahfouz A, Collier P, Lin S, Schlusche AK, Marrocco J, Williams SR, Haase B, Hayes A, Chew JG, Weisenfeld NI, Wong MY, Stein AN, Hardwick SA, Hunt T, Wang Q, Dieterich C, Bent Z, Fedrigo O, Sloan SA, Risso D, Jarvis ED, Flicek P, Luo W, Pitt GS, Frankish A, Smit AB, Ross ME, Tilgner HU. Joglekar A, et al. Nat Commun. 2021 Jan 19;12(1):463. doi: 10.1038/s41467-020-20343-5. Nat Commun. 2021. PMID: 33469025 Free PMC article.
Mostly, one cell type is responsible for brain-region specific DIE. However, for fewer genes, multiple cell types influence DIE. Thus, regional identity can, although rarely, override cell-type specificity. ...
Mostly, one cell type is responsible for brain-region specific DIE. However, for fewer genes, multiple cell types influence DIE. Thus …
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Klionsky DJ, Abdelmohsen K, Abe A, Abedin MJ, Abeliovich H, Acevedo Arozena A, Adachi H, Adams CM, Adams PD, Adeli K, Adhihetty PJ, Adler SG, Agam G, Agarwal R, Aghi MK, Agnello M, Agostinis P, Aguilar PV, Aguirre-Ghiso J, Airoldi EM, Ait-Si-Ali S, Akematsu T, Akporiaye ET, Al-Rubeai M, Albaiceta GM, Albanese C, Albani D, Albert ML, Aldudo J, Algül H, Alirezaei M, Alloza I, Almasan A, Almonte-Beceril M, Alnemri ES, Alonso C, Altan-Bonnet N, Altieri DC, Alvarez S, Alvarez-Erviti L, Alves S, Amadoro G, Amano A, Amantini C, Ambrosio S, Amelio I, Amer AO, Amessou M, Amon A, An Z, Anania FA, Andersen SU, Andley UP, Andreadi CK, Andrieu-Abadie N, Anel A, Ann DK, Anoopkumar-Dukie S, Antonioli M, Aoki H, Apostolova N, Aquila S, Aquilano K, Araki K, Arama E, Aranda A, Araya J, Arcaro A, Arias E, Arimoto H, Ariosa AR, Armstrong JL, Arnould T, Arsov I, Asanuma K, Askanas V, Asselin E, Atarashi R, Atherton SS, Atkin JD, Attardi LD, Auberger P, Auburger G, Aurelian L, Autelli R, Avagliano L, Avantaggiati ML, Avrahami L, Awale S, Azad N, Bachetti T, Backer JM, Bae DH, Bae JS, Bae ON, Bae SH, Baehrecke EH, Baek SH, Baghdiguian S, Bagniewska-Zadworna A, Bai H, Bai J, Bai XY, Bailly Y, Balaji KN, … See abstract for full author list ➔ Klionsky DJ, et al. Autophagy. 2016;12(1):1-222. doi: 10.1080/15548627.2015.1100356. Autophagy. 2016. PMID: 26799652 Free PMC article. No abstract available.
Integration of metabolomics with genomics: Metabolic gene prioritization using metabolomics data and genomic variant (CADD) scores.
Bongaerts M, Bonte R, Demirdas S, Huidekoper HH, Langendonk J, Wilke M, de Valk W, Blom HJ, Reinders MJT, Ruijter GJG. Bongaerts M, et al. Mol Genet Metab. 2022 Jul;136(3):199-218. doi: 10.1016/j.ymgme.2022.05.002. Epub 2022 May 25. Mol Genet Metab. 2022. PMID: 35660124 Free article.
Next, we integrated Reafect with Combined Annotation Dependent Depletion (CADD) scores (a measure for gene variant deleteriousness) and ranked the metabolic genes of 27 IEM patients. We observed that this integrated approach significantly improved the prioritization of the …
Next, we integrated Reafect with Combined Annotation Dependent Depletion (CADD) scores (a measure for gene variant deleteriousness) and rank …
RNA-seq analysis of lignocellulose-related genes in hybrid Eucalyptus with contrasting wood basic density.
Nakahama K, Urata N, Shinya T, Hayashi K, Nanto K, Rosa AC, Kawaoka A. Nakahama K, et al. BMC Plant Biol. 2018 Aug 6;18(1):156. doi: 10.1186/s12870-018-1371-9. BMC Plant Biol. 2018. PMID: 30081831 Free PMC article.
Transcriptomic analysis of two groups of five plants each with high (570-609 kg/m(3)) or low (378-409 kg/m(3)) WBD was carried out by RNA-Seq analysis with total RNAs extracted from developing xylem tissues at a breast height. ...Among plant cell wall modifying g …
Transcriptomic analysis of two groups of five plants each with high (570-609 kg/m(3)) or low (378-409 kg/m(3)) WBD was carried …
Multiplexed (129)Xe HyperCEST MRI Detection of Genetically Reconstituted Bacterial Protein Nanoparticles in Human Cancer Cells.
Mizushima R, Inoue K, Fujiwara H, Iwane AH, Watanabe TM, Kimura A. Mizushima R, et al. Contrast Media Mol Imaging. 2020 Mar 12;2020:5425934. doi: 10.1155/2020/5425934. eCollection 2020. Contrast Media Mol Imaging. 2020. PMID: 32256252 Free PMC article.
Here, we demonstrate the genetic reconstitution of protein nanoparticles with characteristic bicone structures similar to natural GVs in a human breast cancer cell line KPL-4 and genetic control of their size and shape through expression of reduced sets of humanized gas vesicle …
Here, we demonstrate the genetic reconstitution of protein nanoparticles with characteristic bicone structures similar to natural GVs in a h …
Mos positively regulates Xe-Wee1 to lengthen the first mitotic cell cycle of Xenopus.
Murakami MS, Copeland TD, Vande Woude GF. Murakami MS, et al. Genes Dev. 1999 Mar 1;13(5):620-31. doi: 10.1101/gad.13.5.620. Genes Dev. 1999. PMID: 10072389 Free PMC article.
We showed previously that the expression of nondegradable Mos, during early interphase, delays the onset of M phase in the early embryonic cell cycles. Here we report that Xe-Wee1 is required for the Mos-mediated M-phase delay. ...Importantly, we show that th …
We showed previously that the expression of nondegradable Mos, during early interphase, delays the onset of M phase in the early embr …
Engineering Shewanella oneidensis enables xylose-fed microbial fuel cell.
Li F, Li Y, Sun L, Li X, Yin C, An X, Chen X, Tian Y, Song H. Li F, et al. Biotechnol Biofuels. 2017 Aug 8;10:196. doi: 10.1186/s13068-017-0881-2. eCollection 2017. Biotechnol Biofuels. 2017. PMID: 28804512 Free PMC article.
RESULTS: Herein, to enable S. oneidensis to directly utilize xylose as the sole carbon source for bioelectricity production in MFCs, we used synthetic biology strategies to successfully construct four genetically engineered S. oneidensis (namely XE, GE, XS, and GS) by asse …
RESULTS: Herein, to enable S. oneidensis to directly utilize xylose as the sole carbon source for bioelectricity production in MFCs, we used …
Multiplexed Cas9 targeting reveals genomic location effects and gRNA-based staggered breaks influencing mutation efficiency.
Gisler S, Gonçalves JP, Akhtar W, de Jong J, Pindyurin AV, Wessels LFA, van Lohuizen M. Gisler S, et al. Nat Commun. 2019 Apr 8;10(1):1598. doi: 10.1038/s41467-019-09551-w. Nat Commun. 2019. PMID: 30962441 Free PMC article.
Here we leverage our TRIP technology to integrate ~ 1k barcoded reporter genes in the genomes of mouse embryonic stem cells. We target the integrated reporters (IRs) using RNA-guided Cas9 and characterize induced mutations by sequencing. ...
Here we leverage our TRIP technology to integrate ~ 1k barcoded reporter genes in the genomes of mouse embryonic stem cells. We targe …
25 results